Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01506 ATGCCTGGCCGAGCTCCCTTTCACTACGATGTCTTCCTCAGCTTCAGAGGTGAAGATACACGACTTGGTTTTACGGGAAATCTACACAGTTTTCTCGATCAAAGAGGAATTCGCTGCTTCTTCGATGATAAGGAGATtcgaaaaggaaagaaaatcaCTCAAGAACTTATCAATGCAATTGAACAATCCAAGATTGCTATAGTTGTATTTTCTAAGAATTATGCTTTTTCTACGTTTTGTTTGAAGGAACTCACCAAGATCCTAGATTGctatgaagagaagaaaaataatggTCGGATTTTCTTACCGGTTTTTTATGGTGTGGATCCTTCTGATCTCAGATATTGCAGAGGAAGTTTTGGTGAAGCGATGGATAAGCATGAAAAGAGTGAGAGATTCAAGAATGACAAGAAGTTGCTCGACAAATGGAGGACTTCTCTACACAAAGCGGCTGAAATATCTGGCTGTTCTTTCAAGCTTGGgAATGGATATGAATATCAATTAATTGCAAGTATCTTTAAGGAAGTCTCCCTGAAGATTAACCGCACACTTTTACATGTTGCGAATTACCCTGTTGGATTGGAGTCTAGATTGGGTAAAGTAAAATCGCTTCTGAAGGTTCCGTCTGATGATGTAGTCCACATGGTAGGCATCCATGGTATTGGCGGAATTGGTAAAAGTACTGTTGCTCGATGCGTATATAATTCTGTTAGTGACCAATTTGATGGTTTCTGCTGTTTTCTCGAAGATGTGAGAGAGAATTCGCATAAAAATGGCTTACTAAATCTCCAAGAGACTGTACTTACTGAGATACTTGGAGACAAGGAGATCAGGTTGAGAAATGTGCGGAATGGAATGTCAATAATAGAACAAAGGCTCTCAAGTAAAAAAGTTCTTTTGGTTCTTGATGATGTGGACAAAATAGAGCAGTTACAAGCTATTGCTGGAGCACCTAATTGGTTTGGTTCTGGTAGCATAGTAATCATAACAACTCGGGAGAAAAATTTACTATTACAGCATTGGGTTAAAAGTAAATTATATGAGGTGGAGGAGTTGAATGACAAAGAAGCTTGTGAATTACTTAGTTGGAATGCTTTCAAAACTGACAAAGTTGATCCAAAGTACACCAATATTTTAAACCGTGCATTGCGTTATGCTTCTCGGCTCCCGTTGGCCTTGGAAGTAGTGGGTTCCAACTTGtttggaaaaggaaaagaagaatGCAAACTTATATTAGATCGGTATGACAGAATCCCAGATAAAAAAATCCAAGACATACTAAGAGTAAGCTTTGATTCCTTGGATGAAGAAGACAAGGATGTTTTTCTTGACATTGCTTGTTGCTTTGGAGGATATAAGTTGTCAGATGTTGAAAATATACTACATGCTCACCATGGTTCATCAATGAAACTTGGTATTGAGCTGCTGATTGAAAGATCTCTCATAAAGATTGATGATGGTCTTGTGACATTACATGAATTGATACAAGACATGGGTAAAGAAATTGTGCGACAAGAATCAAAAGAGCCCAATGAACGTAGTAGGTTATGGAACATTGAACATGTGGTCCaagttttagaagaaaacaaGGGAACTAGCAAAATTCATATGTTAATTCTGGATTTTCCGAAAGATGGACACGTGGAAGGATCCAAAGGGGAAGAAATAAATTGGGATGGAGAGGCCTTAAAGGAAATGAAAAACCTCAAAACTCTTATTATTAGAAATGGTAATTTTTCCAAAGGCCCGACACATCTTCCAAATAGTTTAAGAGTTTTGAAATGGCATGGATATGATTTATCATCTTTACCATGTAATTTTCATCCAAAGAAACTGTGCATACTCGAGTTGCCTGAAAGCTGCTTAAAGCTGCACAAACCAATCCAGCCATTTGCATATTTGAGAACTTTGGATTTTAGCTACAGTGAATATATAACTGAGATACCTGATGTATCAGGTCTTCGAGATTTAgaaaatttgtcatttaaacATTGTGAGAATTTAACTAAAATTCATGCCTCAGTTGGATATTTGGGTACCCTTAAAATATTGGATGCTTCTAGCTGCAAGAATCTTAATACTTTTCCAGACATCATATTGACCTCTCTTGAAAAACTCAATCTTTCACATTGCTCAAATCTTGAGAGTTTTCCAGAAATATTGGGAAAGATGGAAAACTTAACAGAACTTCATATAACAGGGAGTCCAATAAAAGAATTGCCATTTTCAATTGAAAACCTTACTCGGCTTCGAAAGTTGGAACTACAAATCTGTGGAATGATTCAGTTACCTAGCTGCATTGTCATGTTGCCAGAACTGAGTTTAATACATGTTTCAAACTGTGAAGGGCTGTGGTTATCTAAAAAGAACAAAGGTAAAAAAATGGTGTCAGGGTCTTCAAACATGGATCGTCTTATTCTCACTTACTGCAATATATCCAATGACTTCTTTCCAAAAGGTCTTAACTTTTTATCCAATGTGAAAGATTTAAACCTATCGGGGAATAATTTCACAACTGTTCATGCATGGATTAAAGATTGTCACCTTTTGAGGAACCTTAAACTGGATAATTGCAGTCATCTACAAGAAATTAGAGGGGTTCCAAAGAAATTAGAAACATTTTCTGTGAAAGGTTGCACATCCTTGAAATTCCTGGACCTCACAGTTCTTCCTGCATGCACTTTAGAATCTTGTTCTTTGAAGGAACTGATTGTGGATGATTGTGTGTATCTTCAAAATATTACAGGGCTTCCACAAAACTTGGATCTGTTCTCTGCAAAAGGCTGCACAGCATTGAATTCCCAGAGTATAAGCATCTTGTTGAATCAGGAAGGGATGCAGGCTGGAAACAAAATGTTTCTTTTCCCAAGGAAAAAAATTCCAGAGTGGTTCAGACCTCGTACAAGTGTGAAAAAGGTTCATGGCTCCAGAGTGGTTAGAAAACAAGAAATCGCAGGGTCATTTTCTTTCTGGTTTCGCAACAAATTTCCAGCGATTTCTCTCTGTCTTGTTCTTGGACTGGGGAATGAGCAACCTCTTACAGTCAAGTTTAGCCCCCGAGTATTCATCAATGGCATTAAGCAGTGCATTGGCTGTCAGAAAGTTTACAAGTTCGTGATAGCTACTGATCATGTATTTCTGCTGATGCTTGAAGATAATGGGGACATGGTGCTTTCAGATAACCAGTGGAAACACGTGGAGGTTTCATATGTTGATCATATTACCAATGGTGAGGTGCCAATCAGACAGGGTGCCAGATACAGCGGAATACATGTATTTGAACAAACAACCGATCCAGGAGATTTCCAATTCACCAATCCTCCACAAACAATGATAAACACAAATTTGAATTCAACTTCAGCGAAGGAGGCACACCATAGAGTAAAGGTTGAAAtttcttggttttttttctctcttttagcCTATTCCCATATTACTTTAGTTCTTCTatatttttgctattttttactTTCCTATTGTTTTtgcctatatttttttttccagatcaCTGCGGAGAGACCCCAGAAAGAGCAGACAAAGGTGTTACCCTCCCCCATTCTCTCGTTGTCCCATCTTCAACCTCCAATTGCAGAGGCTAAAAAAGGTCCAGGCTCCAATACTTCCAATACTTCAGAGAGGTCTTTGGAGGATTTCATAGGAGAAACTTCAGAGAGGTTTCTGGAAGAGGAAGTTAATCCTACTACTATTCCAAATGACCCTCCTGTCATTCAAAGTTATTCGGAGGGTGATGATAATATTGAACATGTAGCATTATCCTCTTCTGAACTTGAATCTGAAGACTCTTATTCCAAGACTGAATCCGAAGGTTCTGACTCAGATGATCCCTTTGACTGTGTTCACAGAAGACTAGGTATTAGTGCCAAGGAAACTGTATCTTCTGCCTCAAGTTCTGTAGATTCTTCAATTGGACCAATTAGAGAGGCTATTAACTCCTTGGAGATGTTAATGGTTAAGGATTTATCTGAAGTCTCTTCTGATCCTGACACACAGTCTGGACTTCATCAACTGTTGGATCTACTGTGTCAAAGTAGCCACCCCAAGGTGACTGTAGAGGTGAAGGAGGCTATTCATGATTTCAGGAGAAAGGCATTTTTATCATTCCAAGAATTCCAATCCACCGTTGAGTCTGTCAACAAACTGAAGGATTTTGAAAAGCATCTAGAAAGAATTCAGCAAGAGACTGTAGCAGGCAAGGGTCGAAGGAAGGACCTCaaaaactcaataaaaaattttTGTTCGGCTATCAAAACTGAAAATAGTAGAAAGAATGATTTAGAGGCAGAAATTGCAACTTTAAGAATACAGCTATCTAGCAAAGAAAGGAGCCTTGAACAACTTGTGCTGAATCTCAAGAATCAGAAGGAATCCCTCTCAACCTATTCAACAACTTATGCTTCTCTCAACGAGCAAGCTCAAGCACTATTAAAACAAGCCGATGATCTACTTGCTGCAAGCAGTGGGGTAAAGCATGAGGGTAAAGCCGCCGAAGCTAAGCAGATTACACTCAAGTCAACCTGGTCTATTGATCTCACCAACCAGTTCaataagattaaaaataacattcacCTTTTATGA 4596 0.3718 MPGRAPFHYDVFLSFRGEDTRLGFTGNLHSFLDQRGIRCFFDDKEIRKGKKITQELINAIEQSKIAIVVFSKNYAFSTFCLKELTKILDCYEEKKNNGRIFLPVFYGVDPSDLRYCRGSFGEAMDKHEKSERFKNDKKLLDKWRTSLHKAAEISGCSFKLGNGYEYQLIASIFKEVSLKINRTLLHVANYPVGLESRLGKVKSLLKVPSDDVVHMVGIHGIGGIGKSTVARCVYNSVSDQFDGFCCFLEDVRENSHKNGLLNLQETVLTEILGDKEIRLRNVRNGMSIIEQRLSSKKVLLVLDDVDKIEQLQAIAGAPNWFGSGSIVIITTREKNLLLQHWVKSKLYEVEELNDKEACELLSWNAFKTDKVDPKYTNILNRALRYASRLPLALEVVGSNLFGKGKEECKLILDRYDRIPDKKIQDILRVSFDSLDEEDKDVFLDIACCFGGYKLSDVENILHAHHGSSMKLGIELLIERSLIKIDDGLVTLHELIQDMGKEIVRQESKEPNERSRLWNIEHVVQVLEENKGTSKIHMLILDFPKDGHVEGSKGEEINWDGEALKEMKNLKTLIIRNGNFSKGPTHLPNSLRVLKWHGYDLSSLPCNFHPKKLCILELPESCLKLHKPIQPFAYLRTLDFSYSEYITEIPDVSGLRDLENLSFKHCENLTKIHASVGYLGTLKILDASSCKNLNTFPDIILTSLEKLNLSHCSNLESFPEILGKMENLTELHITGSPIKELPFSIENLTRLRKLELQICGMIQLPSCIVMLPELSLIHVSNCEGLWLSKKNKGKKMVSGSSNMDRLILTYCNISNDFFPKGLNFLSNVKDLNLSGNNFTTVHAWIKDCHLLRNLKLDNCSHLQEIRGVPKKLETFSVKGCTSLKFLDLTVLPACTLESCSLKELIVDDCVYLQNITGLPQNLDLFSAKGCTALNSQSISILLNQEGMQAGNKMFLFPRKKIPEWFRPRTSVKKVHGSRVVRKQEIAGSFSFWFRNKFPAISLCLVLGLGNEQPLTVKFSPRVFINGIKQCIGCQKVYKFVIATDHVFLLMLEDNGDMVLSDNQWKHVEVSYVDHITNGEVPIRQGARYSGIHVFEQTTDPGDFQFTNPPQTMINTNLNSTSAKEAHHRVKVEISWFFFSLLAYSHITLVLLYFCYFLLSYCFCLYFFFQITAERPQKEQTKVLPSPILSLSHLQPPIAEAKKGPGSNTSNTSERSLEDFIGETSERFLEEEVNPTTIPNDPPVIQSYSEGDDNIEHVALSSSELESEDSYSKTESEGSDSDDPFDCVHRRLGISAKETVSSASSSVDSSIGPIREAINSLEMLMVKDLSEVSSDPDTQSGLHQLLDLLCQSSHPKVTVEVKEAIHDFRRKAFLSFQEFQSTVESVNKLKDFEKHLERIQQETVAGKGRRKDLKNSIKNFCSAIKTENSRKNDLEAEIATLRIQLSSKERSLEQLVLNLKNQKESLSTYSTTYASLNEQAQALLKQADDLLAASSGVKHEGKAAEAKQITLKSTWSIDLTNQFNKIKNNIHLL 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01506 1531 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 885 IPR044974 GO:0006952
Tsu08g01506 1531 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 155 IPR035897 -
Tsu08g01506 1531 SUPERFAMILY "Winged helix" DNA-binding domain 421 527 IPR036390 -
Tsu08g01506 1531 MobiDBLite consensus disorder prediction 1259 1283 - -
Tsu08g01506 1531 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 893 1070 IPR044974 GO:0006952
Tsu08g01506 1531 PANTHER ARCHAEAL ATPASE 19 885 - -
Tsu08g01506 1531 Pfam TIR domain 9 156 IPR000157 GO:0007165
Tsu08g01506 1531 PRINTS Disease resistance protein signature 292 306 - -
Tsu08g01506 1531 PRINTS Disease resistance protein signature 386 400 - -
Tsu08g01506 1531 PRINTS Disease resistance protein signature 698 714 - -
Tsu08g01506 1531 PRINTS Disease resistance protein signature 215 230 - -
Tsu08g01506 1531 Gene3D - 351 435 IPR042197 -
Tsu08g01506 1531 Coils Coil 1422 1463 - -
Tsu08g01506 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 445 IPR027417 -
Tsu08g01506 1531 SUPERFAMILY L domain-like 558 914 - -
Tsu08g01506 1531 ProSiteProfiles TIR domain profile. 7 180 IPR000157 GO:0007165
Tsu08g01506 1531 Pfam NB-ARC domain 198 403 IPR002182 GO:0043531
Tsu08g01506 1531 Gene3D Ribonuclease Inhibitor 552 716 IPR032675 -
Tsu08g01506 1531 SMART till_3 8 153 IPR000157 GO:0007165
Tsu08g01506 1531 Coils Coil 1471 1491 - -
Tsu08g01506 1531 Gene3D Ribonuclease Inhibitor 717 931 IPR032675 -
Tsu08g01506 1531 Gene3D - 182 344 IPR027417 -
Tsu08g01506 1531 Gene3D - 4 181 IPR035897 -
Tsu08g01506 1531 PANTHER ARCHAEAL ATPASE 893 1070 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01506 Tsu-Chr8 17567407 17574311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01506 9 781 WRKY Transcription Factor Family AT4G12020 29.419 4.44e-72 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01506 - - mtr:MTR_8g042660 1768.82