Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu08g01476 | ATGACAccaatttcttcttcatttccaatccaatctcttctttctttctcattcttcatcttcttcttcttcgctaCCTTCACTTTTCTAGAATCTTCCGCAGACTGTACCCACTTCGAACACGCGCCAATGAGTACCTTATGCGGAGGTATTCGCGATTCACATGGCTCTCAAAACTCTGCTGAAATTGAATCCCTTGGGAGATTCGCTGTTGATCAACATAACACCAAACAGAATTCACTTCTGGAGTTTACAAGGGTGGTAAAAGCACGTGAGCAGCTTGTTGCTGGTACACTTCATTATCTTACTCTCGAGGTTATTGATGGGGATGAGAAAAAGATCTATGAAGCCAAAGTCTGGGTCAAACCCTGGATGAACTTTAAAGAACTCCAAGAGTTCAAGCCTGCTGGTGATGGTGGTGCTCCATCATTTACCTCTGCAGATCTTGGTGTGCTAAAGGATGGCCACAAGCCAGGGTGGCAGTCTGTGCCAACACATGACCCTCAAGTTCAGGATGCAGCAAATCATGCTATTAAGTCCATCCAGCAGAGGTCAAATTCACTAGTGCCCTATGAGCTCCATGAGGTTACTGATGCAAAGGCTGAGGTCAATGATGATGTTGCCAAGTTTAGTTTGCTTCTCAAAGTCAAGCGgggagagaaggaagagaagttCAAGGTAGAGGTGCACAAGAATACTGAGGGTAGTTTCCATCTTAATCAGATGGAAGCCGATCATTCCTAA | 744 | 0.3992 | MTPISSSFPIQSLLSFSFFIFFFFATFTFLESSADCTHFEHAPMSTLCGGIRDSHGSQNSAEIESLGRFAVDQHNTKQNSLLEFTRVVKAREQLVAGTLHYLTLEVIDGDEKKIYEAKVWVKPWMNFKELQEFKPAGDGGAPSFTSADLGVLKDGHKPGWQSVPTHDPQVQDAANHAIKSIQQRSNSLVPYELHEVTDAKAEVNDDVAKFSLLLKVKRGEKEEKFKVEVHKNTEGSFHLNQMEADHS | 247 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu08g01476 | 247 | SMART | CY_4 | 46 | 136 | IPR000010 | GO:0004869 | |
| Tsu08g01476 | 247 | PANTHER | CYSTATIN FAMILY MEMBER | 44 | 243 | IPR027214 | GO:0004869 | |
| Tsu08g01476 | 247 | SUPERFAMILY | Cystatin/monellin | 44 | 137 | IPR046350 | - | |
| Tsu08g01476 | 247 | Pfam | Aspartic acid proteinase inhibitor | 60 | 135 | IPR000010 | GO:0004869 | |
| Tsu08g01476 | 247 | Gene3D | - | 44 | 144 | - | - | |
| Tsu08g01476 | 247 | SUPERFAMILY | Cystatin/monellin | 155 | 237 | IPR046350 | - | |
| Tsu08g01476 | 247 | Gene3D | - | 158 | 244 | - | - | |
| Tsu08g01476 | 247 | ProSitePatterns | Cysteine proteases inhibitors signature. | 92 | 105 | IPR018073 | - | |
| Tsu08g01476 | 247 | PANTHER | CYSTEINE PROTEINASE INHIBITOR 6 | 44 | 243 | - | - | |
| Tsu08g01476 | 247 | CDD | CY | 49 | 135 | IPR000010 | GO:0004869 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu08g01476 | Tsu-Chr8 | 17068255 | 17073000 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu08g01476 | - | - | gmx:100499887 | 336.65 |