LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu08g01465	ATGGTTCAGAACAACATGAAAGGGCGTATAGAAAGATTGGAATGTGATAGAGAAGAAGAACTCTCCTTTTTTAGGGAATTGAAGAAACGTCAGAATGAACATGTTCCTAGCTTCTTGCTATGTGCTTCTGAAGATTATGAATATGACACTAATGTTGGTAATGGAAAGTTTTCACTCTATAGGATTCCTTCAGGGAGGAAAGAGCATGGACTTGAGCCTctagaaacaaaaaacaaaagcgACTTTGATTGGTTGAAAACACCACCAGCAACTCCTCTGTTTCCATCCCTGGAAATGGAACCTAGTGCCAAACTTGTCATTCAGAAAGAGCTACCCATTTCTCAGCATATCTCAAGAGCACTATTTGCAAAGAGTGATGTGGAGGCACAAAAACCAAAGGTAAATCAAACCAActcaacaaaatcatcaaagCTTCAAATGAGATCAATAACACCAAGTCATAACAAACAAAGACCAAACCTCATTAAAAATCCAATTGAAACCACAAATTACCATATCAATAATGTCAAAAAAGAACATGATGCTACCAACATTACTAAACATCACCAAAAACAAACCAACAATGTTGATTTTCTTGCTATGAATCAAAAGAAAAGTATTGACACAAATGAAACACAAAGGAAACTTAGAACTAGAGGTGTATCACCATCAATGAAATCAAAGAGTTCAGAAAGTGTAATAGAACTATCAAATGAGAGACCACAAAATCTTAGGACAGATAAAAGGTCAATGTCAAGTACAAGAGGAAGAAGCACTACAAGAGGATCTTCTTTAGTTGGAGGGTCCCAATATCAAGATCCTACTCCAAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGATAAAAGGTCAATGTCAAGTACAAGAGGAAGAAGCACTACAAGAGGATCTTCTTTAGTTGGAGGGTCCCAATATCAAGATCCTACTCCAAAAGCATGTAGACAATCAAGGTCACCATCACCAAGCATATCTAAGAATGGTTTGAATCAATTTGATAGAACACAAAAGAATGTGAAGACACAAAAGGAAACTTTTACTCTAGCAGCTGGTGGAAGTAATGAAAGTAGATCACATTTTAAAGGAAGTAAAATGGTTGAGAGAGTGGTGAATGCTAGAAAATCTAGTATCAATCATGCAGATAGAGAATCAAAACTAAAGCCTATTAAAAATAGGGTATGA	1266	0.3246	MVQNNMKGRIERLECDREEELSFFRELKKRQNEHVPSFLLCASEDYEYDTNVGNGKFSLYRIPSGRKEHGLEPLETKNKSDFDWLKTPPATPLFPSLEMEPSAKLVIQKELPISQHISRALFAKSDVEAQKPKVNQTNSTKSSKLQMRSITPSHNKQRPNLIKNPIETTNYHINNVKKEHDATNITKHHQKQTNNVDFLAMNQKKSIDTNETQRKLRTRGVSPSMKSKSSESVIELSNERPQNLRTDKRSMSSTRGRSTTRGSSLVGGSQYQDPTPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKRSMSSTRGRSTTRGSSLVGGSQYQDPTPKACRQSRSPSPSISKNGLNQFDRTQKNVKTQKETFTLAAGGSNESRSHFKGSKMVERVVNARKSSINHADRESKLKPIKNRV	421

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu08g01465	421	MobiDBLite	consensus disorder prediction	255	271	-	-
	Tsu08g01465	421	MobiDBLite	consensus disorder prediction	216	240	-	-
	Tsu08g01465	421	PANTHER	OS08G0543000 PROTEIN	311	411	-	-
	Tsu08g01465	421	MobiDBLite	consensus disorder prediction	314	387	-	-
	Tsu08g01465	421	MobiDBLite	consensus disorder prediction	179	387	-	-
	Tsu08g01465	421	Coils	Coil	310	311	-	-
	Tsu08g01465	421	MobiDBLite	consensus disorder prediction	188	207	-	-
	Tsu08g01465	421	PANTHER	OS08G0543000 PROTEIN	15	264	-	-
	Tsu08g01465	421	MobiDBLite	consensus disorder prediction	131	164	-	-
	Tsu08g01465	421	MobiDBLite	consensus disorder prediction	402	421	-	-
	Tsu08g01465	421	PANTHER	GASTRIC MUCIN-LIKE PROTEIN	311	411	-	-
	Tsu08g01465	421	PANTHER	GASTRIC MUCIN-LIKE PROTEIN	15	264	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu08g01465	Tsu-Chr8	16928212	16931603	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu08g01465	-		-	gsj:114404473	261.151