Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01463 ATGAGTTCCTTTCGAGTTCTCTCCACCACTACAATCAATGCACCAAATCACAATCTTTGTGATGACTCAAGTCATCATACAATCGATCTAACACCATGGGATCTTCAGTTCCTTCCATATGGAGTCAACCAAAAGGGTCTTCTTTATCACCACACTCTGAAACTAGAcatatcaaatcaaattgaacACCTTAAACACTCTCTTTCATCCACCCTTGAAATGTTTCCCCCTTTTACAGGTCGTCTCAAAATTAAGGAATGCGAAGATAATACTATCTCGTGTTCCATCAAGTGCAACAATGAAGGTGCACTTTTTGTTCACGCCACAGCAGAAAATACTAGCGTCGATGACATTCTTGGACCCACTTATTTTCCTCAAATTCTCCATTCATTTTTCCCACTTAATGGTGTTAAAAACTACGAAGGGACATCAAATCCATTATTTGCAATCCAAGTAACAAAGCTAGTTGATGGCATTTTCATTGGTTGCACAATTAATCATGTGGTGGCAGATGGTACATCAATTTGGCATTTCATCAATTCATGGGCCAAAATCTCAAAGGGTTGTCTTGAAATAACCAAAATCCCATCATTCAAACGTTGGTTTCCAAATGGTATTCAACTTCCGATTAGATTTCCTTTCACAATGGAACAACAAAATAATCACTATAATAATGATAATCATAATGAAGTCAACTCCAAACCATCAGTGAGGTTATTTCATTTCACTAAAGAGAATATTGCAAAACTAAAATTCAAAGCAAACTTAGAGGCTGGTACAGAGAATATATCTTCTTTGCAAGCACTTTTCACTCACATTTGGCGATCAATTATGCATTCTAAAAATCTTGACCTAGAAGAAGAAGTGGATTTTGTGGTTGTTTTAGGAATTAGACCAAGGTTGATTCCTCCATTGAAAGAGGATTACTTTGGGAACGCTATGATAGATTGTGTGGTTACCATGAAAGCTCGCGACTTGTTGGAAGACGATGGGCTTGGTAAAGGTGCTTTGAAAATGAATAAGATGATTGCTTTACACTCTGATGAGAAGTTAAATAATCAGTAtgaaaattggttgaaaacaCCAAATTTTCTTAATGTTGGTATGTACGATAGTAAAACATTAATTAGTAGTAGTTCACCTCGATTTGATGTTTATGGTAATGATTTTGGTTGGGGAAAACCTGTGGCGGTTCAACATGGGgtagaaaataaagaaaatggaATTATTAGTGTGTTTGCAGGTGCAGAAGAAGGTAGTATGGACCTTGAAGTGTGTTATTCTTATGAAACTTTGGAGGCAATTTGTAATGATCCTGAGTTTATGGAGGTTGTGTCCAACTAA 1344 0.3534 MSSFRVLSTTTINAPNHNLCDDSSHHTIDLTPWDLQFLPYGVNQKGLLYHHTLKLDISNQIEHLKHSLSSTLEMFPPFTGRLKIKECEDNTISCSIKCNNEGALFVHATAENTSVDDILGPTYFPQILHSFFPLNGVKNYEGTSNPLFAIQVTKLVDGIFIGCTINHVVADGTSIWHFINSWAKISKGCLEITKIPSFKRWFPNGIQLPIRFPFTMEQQNNHYNNDNHNEVNSKPSVRLFHFTKENIAKLKFKANLEAGTENISSLQALFTHIWRSIMHSKNLDLEEEVDFVVVLGIRPRLIPPLKEDYFGNAMIDCVVTMKARDLLEDDGLGKGALKMNKMIALHSDEKLNNQYENWLKTPNFLNVGMYDSKTLISSSSPRFDVYGNDFGWGKPVAVQHGVENKENGIISVFAGAEEGSMDLEVCYSYETLEAICNDPEFMEVVSN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01463 447 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 445 - -
Tsu08g01463 447 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 445 - -
Tsu08g01463 447 Pfam Transferase family 23 442 - -
Tsu08g01463 447 Gene3D - 4 209 IPR023213 -
Tsu08g01463 447 Gene3D - 214 436 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01463 Tsu-Chr8 16888456 16889799 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01463 64 433 Monolignol Biosynthesis Gene Families AT5G48930 27.202 6.28e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01463 - - gmx:100500257 490.345