Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01457 ATGAGTTCTGTCCATGTCCTCTCTTCCACTACAATCCATGCACTAAATCACAATCTTTGTGACTCAAATTATCATACAATCAATCTAACACCATGGGATCTACAATTTCTTCCATATGGATACAATCAAAAGGGTCTTCTTTATCACAACTCTTCCGAATTAGATACAACAAATCAAATCCAACACCTTAAACACTCTCTTTCCAATACTCTTGATTTTTTTCCACCACTCACAAGTCGTCTCAAAATAACGGAACATGAAGATAACACAATCTCCTGTTGCATCATGTGTAACAACGAAGGCGCACTCTTTGTTCACGCTATAGCAAAAAATATTAGTGTCGCTGATATTCTTGGACCGTCTTATCATTCTCCTATTATCCCCTCATGTTTTGCCCTTAACGGAGTTAAAAACTACGAAGGGACATCACAACCATTACTTGCGGTTCAAGTAACAGAGTTAGTTGACGGCATCTTCATTGGCTTCACAATCAACCACGTGATTGTTGATGGTAAGTCGTTTTGGCATTTCATTAATTCATGGTCTGAAATCTCGAGAGGTTGTCTTAAAATATCCAAACTTCCAATATTTGAACGTTGGTTTCCAAAAGGTGTTGAATGTCCAATTCGATTTCCTTTCACAATAGATCTACATAACAATCACTCGagtaatgataatgatgaagaaaaaatcaACCTACCATACAGattatttcatttcaaaaaGGAAAGTATCGTAAAACTAAAATTCAAAGCCAACTTAGAGGCCAATACAAAGAACATATCTTCTTTACAAGCACTTCTTACACACATTTGGTGCTCTATTATACGTTCCAAAAAACTTGACTCAGAAGAAAAAGTGAATTTCGTGTTGGATATAGGCGTTAGACATAGGTTGGTTCCTCCATTGCAAGAGAATTATTTTGGTAATGCTGTGTTAGATTGTGTAGTTACCATGCAAGCTGGTGACTTGTTAGAAGACATTGGGCTTGGTAAAGGTTCTTGGGAGATGAACAAGATGATTGCATTGTACTCTAATGAGAAGTTGAAAAATCACTATGAGAATTGGTTGATAACGCCGAGTTTTATTACCCTTAGTGTCGCGAATAGTAATTCAATCGTGATTGCTAATTCACCTTTGTTTGATGTATATGGTAATGATTTTGGTTGGGGAATCCCTGTGGGGGTTCGAAGTGGGGGTGCgaataaaagaaatggaaagatTATTGTGTATGCAGGTGTCGAAAAAGGTAGTATGGACCTCGAAGTGTGTCTTCCTTATGAAATTTTGGAGGCAATAGGAAATGATGATGAGTTTATGGAGTTTGTGTCCAATTAA 1338 0.3595 MSSVHVLSSTTIHALNHNLCDSNYHTINLTPWDLQFLPYGYNQKGLLYHNSSELDTTNQIQHLKHSLSNTLDFFPPLTSRLKITEHEDNTISCCIMCNNEGALFVHAIAKNISVADILGPSYHSPIIPSCFALNGVKNYEGTSQPLLAVQVTELVDGIFIGFTINHVIVDGKSFWHFINSWSEISRGCLKISKLPIFERWFPKGVECPIRFPFTIDLHNNHSSNDNDEEKINLPYRLFHFKKESIVKLKFKANLEANTKNISSLQALLTHIWCSIIRSKKLDSEEKVNFVLDIGVRHRLVPPLQENYFGNAVLDCVVTMQAGDLLEDIGLGKGSWEMNKMIALYSNEKLKNHYENWLITPSFITLSVANSNSIVIANSPLFDVYGNDFGWGIPVGVRSGGANKRNGKIIVYAGVEKGSMDLEVCLPYEILEAIGNDDEFMEFVSN 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01457 445 Pfam Transferase family 22 440 - -
Tsu08g01457 445 Gene3D - 215 434 IPR023213 -
Tsu08g01457 445 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 442 - -
Tsu08g01457 445 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 442 - -
Tsu08g01457 445 Gene3D - 4 207 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01457 Tsu-Chr8 16827979 16829364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01457 61 428 Monolignol Biosynthesis Gene Families AT5G48930 26.531 2.01e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01457 - - gmx:100500257 509.605