Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01408 ATGGCGGTTTCACCTCGTTCGTCATCTCTATCTTATGATGTATTCATTAGCTTCAGAGGAGAAGATACTCGCTTAGGTTTTACTGCTTTTCTCTACAAGACTCTCTCTGACAGAGGAATCCGAACTTTCTTTGACCACAACGACGACGCCGGAAGAGGAATTGCAAAGGCAATTGAAGAGTCCATGATTTCGATTATTGTTTTCTCTGAGAACTATGCTTCTTCTACTTACTGTTTAGATGAACTTGTTTCTATTGTTGACTCTTATACCAAGAAAAACAACAACCACCGTCGATTGGTTTTCCCGGTGTTTTACAACGTCGATCCTTCTCACGTGAGATATCAGAAAGGGATTTATGCAGAGGCACTGGATGCGCTccagaagaaaaacaaattcaattcggataaattgaagaaatggaggAACGCTCTCAATCAAGCAGCTAATTTCTCTGGCTGCCATTTCAAACATGGGGATGGATATGAATACGAGTTAATTGACAGGATTGTAGACATGGTCTCTAGTAAAATTGATTCCTCCCCATTACGTGTTGCGGATCACCCCGTTGGCCTCAATTATCGAGTGCTAGAAGTAAACTGGCTTCTCAATGATGATGTCGCCGGTTCCAATGGAGCTGGAGTCAAGGTGCTTGGTATCTACGGCATGCCAGGAATGGGGAAGACAACCCTTGCTCGATCTGTCTATAATTCCATTGCCCCTAAGTTTGACGCCTTTTGCTTTCTTGAAGACGTCCGAGAAAATTCAGCAAAACACGGGTTAATTCATATTCAAGAGACCCTTCTCACCGGTATAGCTGGACAGAAGAAGAACATGAACCTTCAATTAGCAAGTGTCGGTGAAGGACTTCTGCTGTTGAAGCATATGCTCCACCGCAAGAAGGTTCTTTTGGTTCTTGACGATGTTAACACCTCAGATCAGTTGAAAGCTATTGTTGGAGGAGGCCCTAACTATTTTGGTTATGGCAGCGCCATCATCATTACTACCAGGGACAAACAGTTTCTAACAACTAATGGGGTTGATACAACATACAAAATAGAGGCTTTGACTAAGGACGAATCCCTTGAGCTGCTTTGTTGGAATGCTTTCAAGACCAACAAAATTTTTCCAGATTTTCTCGACCTATTAAACCGTGCAACAACTTACGCGTCCGGCCTTCCTCTGGCTTTGGAGGTTATAGGCTCAAACCTCTATGGGAAAGGAGTAGAAGAATGGGAATCTGCATTAAATTCCTATGAAAAAATTCCTTCAAAAGATATCCAAACCATACTTAAGCAAACCTACCATGCTTTGGATCGAGATGTCAGGCAAATTTTTCTCGACATCGCATGTTTCTTCAAAGGATACAAACTCTCAGAGGTTGAATACCTACTCAGTGCTCATTACGGTTACGGCTTCGAACCCCACCATTTCAAAGTCTTGCTTGAAAAATCTCTGATTCAGATTGACGAGCACAATCGTGTGAAAATGCATGACCTGATACAAGACATGGGCAGAGAAATCGTGACACAGGAATCACCAGAACACCCTGGCAAACGCAGTAGGCTATGGCTTACGAAGGATATCGTCGATGTTTTGGAAAACAATACGGGAACAAGTGAAATTCAAAGCATCATTTTGGATTTCCCCAAATATGAAAAAGTGGTACAATGGGATGGAAAAGCCTTCAAGAAGATGAATCACCTCCAGATACTTATTATTAGAAGTCAGCGTTTTTCTGAAGGTCCAAAGAATCTGCCAAATAGTTTAAGAGTCCTTGAGTGGTGGGGATATCCTTCACAGACTTTACCTTCTTATTTTTACCCCGAGAAACTATCTGTTCTGAAGTTACCGCACAGTTCCTTTCTGTCACTGGAGCTGTCCAAGTCAAAGAAGTTCGTAAATATGAGACTCTTAAATTTTCATGAATGTGAATTTATAACTCATATATCTGATGTATCTGGTGCCCCAAACTTAGAAGAACTGTCTCTTGTTCGTTGTCAGAATTTAGTTGAAATTCACGACTCAGTTGGATTCTTGGATAAACTTAAAATTCTGAATGTTCAGGGTTGTGGCAAGCTTCGGACTGTTCCACCCATCCATTTGACTTCTCTCGAACACCTCAATCTTTCACAGTGTTCTAGTCTTGTGAGTTTCCCTGAGATATTaggaaatatgaaaaatattacaaCTCTTTCTTTGGAATACACTGCCATAAGTGAATTTCCATATTCAATTGGATATCTTCCCCGACTTAAAAGTTTAGAACTGCACGGATGTGGAAAGCTTCGTTTACCAAGTAGCATTATCCTATTGTCAGAACTTGAGGAGTTGAATATTTGGCAATGTGAAGGGTTGCAATTATATAAACAAGACAAATGTATAGAAAAAGTTGGTTCAACGGTGTCTTCAAACGTCAAGTATATTGATTTCTTATCTTGCAATATATCAGATGAATTCATTCAAATCGGTCTTGCTTGGTTTTCAAATGTGGTAGAGTTAAACCTTTCAGCGAATAATTTCACAATTCTTCCAACATGCATAAAAGAATGCCGTCTTTTGACAACACTTATATTGGATTACTGCATGCATCTTCAAGAAATTGGAGGAATTCCACCTAATTTAGAAATATTATCTGCAATACGGTGCACATCCTTGAAAGATTTAGATCTCGCAAATCTTCTTGCATCCACTGAAGTTTCTTGTCCTTTGAGAGAacttattttggatgattgtgAAAATCTTCAAGAAATTAAAGGGATTCCACTTAGCATAGAACTTTTGTCTGCAAGAAATTGCAGATCCTTGACTGCTTCGTGCAGAAGAATGTTACTGATTCAgGAATTACACGTTAATGGAAATAAGAGCGTTTGTTTGCCCGGAACACAGATGCCAGAGTGGTTTGAGAACTGTAGCAAGGGACATTCAATTTCTTTCTGGTTTCGTGGCAAGTTCCCTGCAATATCTCTCTGTATTGTTGGACACATGTATAAaatccctaccaagttcagacCAATTGTGATCATCAATGGCAATATAATGAAAACTGAGTTACCAACAAAAAcatggtttgattttgagttccCAATGTTAACTGATCATATATTTATTGTTGGTGAAAGACACATAAAATTTGAAGATAATGTGGATGAAGTACTTTCAGAAAATGAATGGAATCATGCGGTGGTTTCTATTGATATTGAGTTTAAATCGAACCCAATTGGACAGTTTGCTGCATGGATTGGACTCCATGTGATCAAACAAAAATGCAGCATGGGCAGAATTCAATTCACGAACCCTTTCAATTACCAACCGATCCAGTGA 3321 0.3827 MAVSPRSSSLSYDVFISFRGEDTRLGFTAFLYKTLSDRGIRTFFDHNDDAGRGIAKAIEESMISIIVFSENYASSTYCLDELVSIVDSYTKKNNNHRRLVFPVFYNVDPSHVRYQKGIYAEALDALQKKNKFNSDKLKKWRNALNQAANFSGCHFKHGDGYEYELIDRIVDMVSSKIDSSPLRVADHPVGLNYRVLEVNWLLNDDVAGSNGAGVKVLGIYGMPGMGKTTLARSVYNSIAPKFDAFCFLEDVRENSAKHGLIHIQETLLTGIAGQKKNMNLQLASVGEGLLLLKHMLHRKKVLLVLDDVNTSDQLKAIVGGGPNYFGYGSAIIITTRDKQFLTTNGVDTTYKIEALTKDESLELLCWNAFKTNKIFPDFLDLLNRATTYASGLPLALEVIGSNLYGKGVEEWESALNSYEKIPSKDIQTILKQTYHALDRDVRQIFLDIACFFKGYKLSEVEYLLSAHYGYGFEPHHFKVLLEKSLIQIDEHNRVKMHDLIQDMGREIVTQESPEHPGKRSRLWLTKDIVDVLENNTGTSEIQSIILDFPKYEKVVQWDGKAFKKMNHLQILIIRSQRFSEGPKNLPNSLRVLEWWGYPSQTLPSYFYPEKLSVLKLPHSSFLSLELSKSKKFVNMRLLNFHECEFITHISDVSGAPNLEELSLVRCQNLVEIHDSVGFLDKLKILNVQGCGKLRTVPPIHLTSLEHLNLSQCSSLVSFPEILGNMKNITTLSLEYTAISEFPYSIGYLPRLKSLELHGCGKLRLPSSIILLSELEELNIWQCEGLQLYKQDKCIEKVGSTVSSNVKYIDFLSCNISDEFIQIGLAWFSNVVELNLSANNFTILPTCIKECRLLTTLILDYCMHLQEIGGIPPNLEILSAIRCTSLKDLDLANLLASTEVSCPLRELILDDCENLQEIKGIPLSIELLSARNCRSLTASCRRMLLIQELHVNGNKSVCLPGTQMPEWFENCSKGHSISFWFRGKFPAISLCIVGHMYKIPTKFRPIVIINGNIMKTELPTKTWFDFEFPMLTDHIFIVGERHIKFEDNVDEVLSENEWNHAVVSIDIEFKSNPIGQFAAWIGLHVIKQKCSMGRIQFTNPFNYQPIQ 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01408 1106 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 448 IPR027417 -
Tsu08g01408 1106 ProSiteProfiles TIR domain profile. 10 177 IPR000157 GO:0007165
Tsu08g01408 1106 Gene3D - 6 185 IPR035897 -
Tsu08g01408 1106 Gene3D - 189 347 IPR027417 -
Tsu08g01408 1106 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 152 IPR035897 -
Tsu08g01408 1106 CDD AAA 219 282 - -
Tsu08g01408 1106 Pfam TIR domain 12 177 IPR000157 GO:0007165
Tsu08g01408 1106 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 891 IPR044974 GO:0006952
Tsu08g01408 1106 Gene3D - 354 444 IPR042197 -
Tsu08g01408 1106 SMART till_3 11 150 IPR000157 GO:0007165
Tsu08g01408 1106 SUPERFAMILY L domain-like 553 888 - -
Tsu08g01408 1106 Coils Coil 123 143 - -
Tsu08g01408 1106 PRINTS Disease resistance protein signature 389 403 - -
Tsu08g01408 1106 PRINTS Disease resistance protein signature 216 231 - -
Tsu08g01408 1106 PRINTS Disease resistance protein signature 699 715 - -
Tsu08g01408 1106 PRINTS Disease resistance protein signature 295 309 - -
Tsu08g01408 1106 PANTHER ARCHAEAL ATPASE 22 891 - -
Tsu08g01408 1106 PANTHER ARCHAEAL ATPASE 895 1063 - -
Tsu08g01408 1106 Pfam NB-ARC domain 210 438 IPR002182 GO:0043531
Tsu08g01408 1106 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 895 1063 IPR044974 GO:0006952
Tsu08g01408 1106 Gene3D Ribonuclease Inhibitor 720 930 IPR032675 -
Tsu08g01408 1106 Gene3D Ribonuclease Inhibitor 539 719 IPR032675 -
Tsu08g01408 1106 SUPERFAMILY "Winged helix" DNA-binding domain 425 533 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01408 Tsu-Chr8 16388432 16393468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01408 5 855 WRKY Transcription Factor Family AT4G12020 30.839 4.05e-84 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01408 - - mtr:MTR_8g039870 1745.71