Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01407 ATGCTTGTCTCTGAAATAGTTGGACATCAGAACAGTACTATGTTTGAAAATGTGGATGAAGGGATGCCGACGGCGATAAAACATATGCTCAACCAAAAGAAGGTTTTCTTGATTCTTGAGGACGTTCATGATTCAGAAGCCTTGAAAGCCATTGTTAAACTGACTACTTTCTTTGGTTTTGGTAGCAAAGTTATTATTACTACATGGGACAAATGTTTTCTAGAACTTCATGGCATTAAAAGAATATATGAGGTAGAAAGAATGAATAAGGTAGAAGCTTTTCAATTGCTTAATTTGAAAGCTTTCGATTCTATGAATGTTAGTCCTTGTTATCTGACCATTTTAGAGGGTCTTGAAACTTACGCTTCTGGGCATCCTTTCATTTTGGAGGTGATAGGTTCCTACTTGAGTGGGAAAAGTATCGAAGAATGTGAACTTGCATTGCTCCAGTATAAACAAATTCCAAACGgagacataaaaaaaattctacaagGAACTTTTGATGCTTTGGAGAAATTTCAGCAGAATATGTTAATTCACATTGCACTTCACCTCAGAGAAAAGGAATTAGCAATGGTTGAAGACTTGCTTCTTTGTAAATATGGAGTGTGCCCAAAAGCTGATACTAGAGTGTTGCTTAAGAAATCTCTGATAAAGATTAATGAGACTGGTCAAGTGATATTACATGGCTTAACACAAGACATGGTTAGAGATAATGTTCCACCTGATGGAAGTGTGATTGAATATCAATCATTACAGCAATGA 765 0.3503 MLVSEIVGHQNSTMFENVDEGMPTAIKHMLNQKKVFLILEDVHDSEALKAIVKLTTFFGFGSKVIITTWDKCFLELHGIKRIYEVERMNKVEAFQLLNLKAFDSMNVSPCYLTILEGLETYASGHPFILEVIGSYLSGKSIEECELALLQYKQIPNGDIKKILQGTFDALEKFQQNMLIHIALHLREKELAMVEDLLLCKYGVCPKADTRVLLKKSLIKINETGQVILHGLTQDMVRDNVPPDGSVIEYQSLQQ 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01407 254 Gene3D - 1 79 IPR027417 -
Tsu08g01407 254 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 244 IPR044974 GO:0006952
Tsu08g01407 254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 180 IPR027417 -
Tsu08g01407 254 SUPERFAMILY "Winged helix" DNA-binding domain 158 231 IPR036390 -
Tsu08g01407 254 Pfam NB-ARC domain 20 143 IPR002182 GO:0043531
Tsu08g01407 254 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01407 Tsu-Chr8 16384096 16384860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01407 26 237 WRKY Transcription Factor Family AT5G45050 32.110 4.56e-23 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01407 - - mtr:MTR_8g039800 382.874