Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01389 ATGGCGGTTGAATTTGTTGGTGGTGCTCTTCTCTCTGCTTTCCTTCAAGTCACATTCGAAAAGCTAGCATCTGCTGGAATTCAAGACTACTTTCGAGCAAGAAAACTCAATGACAAGCTACTCAACAAACTCAACATCACGCTTCTCTCCATCAATGCTGTGGTCGATGATGCAGAACTGAAGCAGCTCAGAAATCCAAACGTCGGAGCTTGGCTTGATGCTGTCAAGAATGCTGTGTTAGATGCAGAGGATCTCTTGGAAGAAATTGACATTGAACTTTACAGATGCAACAAACTCGAAGCCAAATCTCAGTCCAGTGCTACTACTAGCAAGGTATGGAACTTTTTCAATGCTTCTTCGAGTTCATTTGACAAAGAAATTGAATCAAAGATGCATGAAGTTCTTGACAACTTAGAATTTCTTGCTAGCAAAAAGGATATATTAGGTTTGAAAGCTGTTAATAGTGGTTTTGGTGTTGGATCTGATAGCCaaatgctaaaaaaaattccatcAACATCTTTGCCTGTTGATTCTGTTATTTATGGTAGAGATGTTGACAAGGAGGTTATCGGTGATTGGCTGACCTCTGATGCTGAGGATGATAATCGTCAGCTATCAATTGTTTCGATAGTTGGTATGGGTGGGATGGGTAAGACCACTCTTGCCCAACACTTATACAATGATCCGAGAATGGAAGGTAAATTTGATGTCAAAGCTTGGGTCTGTGTTTCACAAGATTTTGATGTTTTCAAGGTGATGAGAGCTATTCTTGAGGGTATCACTGGATCAACTGATGATTGTAGAGACCTAAATATGGTCCAAGAAAGGTTGAAGGGAAAACTGGCAGGGAAGAGATTTCTTCTTGTTTTGGATGACATTTGGAACGAAAAACGTGACCAATGGGAAGCTTTGCAGATTCCTTTTAATTGTGGAGCTCATGGAAGCAAAGTTATCGTCACTACACGCAGTCTTAAAGTTGCCTCAGTTACGCAGTCAACTAGAATACATCGTCTAGAGGAATTACAAGAAGAACATTGCTGGAAGTTGTTTTGCAAACATGCATTCCTAGATGAAAACCCTCAAATAAATTCTGACGCTAAGGAGATTGGTAAAAAGATACTTAGAAAATGCCAAGGATTGCCGTTAGCCTTGAAAACAATCGGAAGTCTCTTGTACACAAAATCATCTTTGGTGGAATGGGAAAGTATATTGGCAAGCGAGATATGGGAATTACCAGAAGAGGAGAGTAACATCATCCCCGCTTTAATGTTGAGCTATCATCACCTTCCTTCTCATCTCAAGAGATGTTTTGCTTATTGTGCCTTATTCCCTAAAAATTATGTGTTCGAAAAGgagcatttaattttattatggaTAGCTGAAAATTTTCTGCAATGCACTCGACATAATATGTGTGTGGAAGATGTCGGTGAACAATACTTCAATGATCTATTTTCAAGGTCATTTTTTCAACAATCAAGGAAATATGCAATGTGTTTTATCATGCATGATCTTCTCAATGATTTGGCAAAATATGTATGTGGGGATGTTTGCTTCACATTACAAGATGAGcaatcaaataatatattgaaaACCACTCGCCATTTCTCATTTTTAGAAAATGCAAATAAATCTCTTGAAAGATTTGAGACCTTCAACAATGCTAATAGATTACGCACATATCTCCCATTATGCTTGACACCCCATGCTATTCCATGGAATCTCCCAATGCCTAGCACACTTATGGAGGAACTGATCTCAAAGTTTAATTTATGTCGTGTCATGTCATTGATTTGTTGCTCCTTGGATAATGGGTTGCCTGACACCATAGGAAATCTCAAGTATCTCCGTTATCTAGACCTTTCTGGTACCAACATAAAAAGGCTACCTGATTCAGTGTGTTCTCTATATACCTTGCAAACACTCAAGTCGAGGTATTGTCGGTGTTTGGAAGAGTTGCCCTTGAATTTACATAAACTCACTAATTTGCGTTATCTTGATTTTTGTGGAACTAAAGTGAGAAAAATGCCAATGCATATTGGAAAACTAAAGCATCTTCAAGTACTGAGTTCTTTTTATGTGGGTAAAGGTAGTGGCTCCAATATTCATCAGTTAGGCGAACTCAATCTTCACGGAACATTTTCAATTTCAGAGCTGCAAAACATTGTAAATCCCTCTGATGCGTTGGCAgcaaatttgaaaagaaaatcacACCTTGTGAGGTTAGAGTTAAAATGGAATGCAAATAGTGATAATTCAGTGAAAGAAAGGGAAGTGCTCGAGAACCTACAACCTTCCAAACACTTGAAGGAGTTGTCTATCTGGAGCTATGGCGGTACACTATTTCCAGATTGGTTTGGAGTTAATTCATTATCAAATGTGGTGTCCTTAGAGTTgagaaaatgtgaaaattgtGTGTTGTTGCCTCCACTTGGAATTTTGCCATCTCTCAAGGAACTGCTGATCACAGGGTTATCAGGGATAGTGGTGATTGGTAGTGAATTTTATGGGAATGAAAGCAGCTCTTATCCTGTTATTCCATTTGCATCCTTGCAAACCTTAACCTTTCATAGCATGATAGGATGGGAAGAATGGGATTGTAAAACTGTGACAGGTGCTTTTCCATGTCTCCAAAAGCTTTCTATTACAAATTGTCCGAATCTAAAAGGGTGTTTGCCTGAGCAACTTCCATGTTTGATGACACTTCAAATTAATTATTGCAAACAGCTTGATTTGGAAAGATCATTGCTTGAATTGGTTACGGACACCTTACCATGCTTGTCACTCGAATCATTGATAATTTGGGATTGCCCAACTATGAACATTCCCCTAAGCTCTTGCTACAATTTCCTTGTATATTTGTACATCAGATATAGTTGTGACTCTTTAAGGACCTTTCCGCTGGATTTCTTCCCAAAACTCCAGCAACTTAATTTTGAGTATTGTAGTAATCTTGAAATGATTTCACTGGAGCATGCTAATAGCCTTAAATATCTGTCTATTTTTGGGTGTCCTCAATTTGTATCATTTTCTATGGGAATATCCTCTGCACCCAGGCTAGAAAATCTCGAGCTTCAAAATTTGGAGAATATAAAATCCTTGCCTGAATGCATGGACACTCTCTTTCCATCTCTTGATAGGCTAGTTGTAGAGAATTGTCCACAATTGGAGTCGTTTGATGGAGGTTTTCCATCAAACCTGCAAAACTTGAATCTTTGTGGATGCTCCGAACTTTTTATGGCCTCGTTGAAGCGGACTTTGGGAATCAACACTTCCCTAAAACGTCTGTTTCTTGAAAATATTGACGTGGAGTCTTTTCCCGATCTCGGGCTGCTTCCCCTCTCTCTTAATCATCTTTCTATCAGTAGTTGTGTAAATCTTAAAAAACTGGACTACGAGGGTCTCTGCCGCTCCTCTTCTCTTGAGTCATTGTGTCTCAGTAGTTGCCCCAACCTTCAATGCTTACCAGTGGAGGGTCTGCCTAAATCCATTTCAGATCTAGAAATTTGTGGTCCTTCTGTTCTCAAAGAACGATACATGAAACCTAAAGGTGAAGAATGGGGGAAGATTTCTCACATTCAACGTGTCGTGATCAATGAC 3600 0.3831 MAVEFVGGALLSAFLQVTFEKLASAGIQDYFRARKLNDKLLNKLNITLLSINAVVDDAELKQLRNPNVGAWLDAVKNAVLDAEDLLEEIDIELYRCNKLEAKSQSSATTSKVWNFFNASSSSFDKEIESKMHEVLDNLEFLASKKDILGLKAVNSGFGVGSDSQMLKKIPSTSLPVDSVIYGRDVDKEVIGDWLTSDAEDDNRQLSIVSIVGMGGMGKTTLAQHLYNDPRMEGKFDVKAWVCVSQDFDVFKVMRAILEGITGSTDDCRDLNMVQERLKGKLAGKRFLLVLDDIWNEKRDQWEALQIPFNCGAHGSKVIVTTRSLKVASVTQSTRIHRLEELQEEHCWKLFCKHAFLDENPQINSDAKEIGKKILRKCQGLPLALKTIGSLLYTKSSLVEWESILASEIWELPEEESNIIPALMLSYHHLPSHLKRCFAYCALFPKNYVFEKEHLILLWIAENFLQCTRHNMCVEDVGEQYFNDLFSRSFFQQSRKYAMCFIMHDLLNDLAKYVCGDVCFTLQDEQSNNILKTTRHFSFLENANKSLERFETFNNANRLRTYLPLCLTPHAIPWNLPMPSTLMEELISKFNLCRVMSLICCSLDNGLPDTIGNLKYLRYLDLSGTNIKRLPDSVCSLYTLQTLKSRYCRCLEELPLNLHKLTNLRYLDFCGTKVRKMPMHIGKLKHLQVLSSFYVGKGSGSNIHQLGELNLHGTFSISELQNIVNPSDALAANLKRKSHLVRLELKWNANSDNSVKEREVLENLQPSKHLKELSIWSYGGTLFPDWFGVNSLSNVVSLELRKCENCVLLPPLGILPSLKELLITGLSGIVVIGSEFYGNESSSYPVIPFASLQTLTFHSMIGWEEWDCKTVTGAFPCLQKLSITNCPNLKGCLPEQLPCLMTLQINYCKQLDLERSLLELVTDTLPCLSLESLIIWDCPTMNIPLSSCYNFLVYLYIRYSCDSLRTFPLDFFPKLQQLNFEYCSNLEMISLEHANSLKYLSIFGCPQFVSFSMGISSAPRLENLELQNLENIKSLPECMDTLFPSLDRLVVENCPQLESFDGGFPSNLQNLNLCGCSELFMASLKRTLGINTSLKRLFLENIDVESFPDLGLLPLSLNHLSISSCVNLKKLDYEGLCRSSSLESLCLSSCPNLQCLPVEGLPKSISDLEICGPSVLKERYMKPKGEEWGKISHIQRVVIND 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01389 1200 SUPERFAMILY L domain-like 910 1187 - -
Tsu08g01389 1200 SUPERFAMILY L domain-like 502 939 - -
Tsu08g01389 1200 PRINTS Disease resistance protein signature 611 627 - -
Tsu08g01389 1200 PRINTS Disease resistance protein signature 280 294 - -
Tsu08g01389 1200 PRINTS Disease resistance protein signature 207 222 - -
Tsu08g01389 1200 PRINTS Disease resistance protein signature 377 391 - -
Tsu08g01389 1200 PANTHER OS05G0414200 PROTEIN 13 942 - -
Tsu08g01389 1200 Coils Coil 72 102 - -
Tsu08g01389 1200 PANTHER DISEASE RESISTANCE PROTEIN RP 13 942 IPR044974 GO:0006952
Tsu08g01389 1200 Gene3D - 15 131 - -
Tsu08g01389 1200 Gene3D - 161 336 IPR027417 -
Tsu08g01389 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 440 IPR027417 -
Tsu08g01389 1200 Gene3D - 340 424 IPR042197 -
Tsu08g01389 1200 Pfam Rx N-terminal domain 11 104 IPR041118 -
Tsu08g01389 1200 Gene3D Ribonuclease Inhibitor 909 1196 IPR032675 -
Tsu08g01389 1200 Gene3D Ribonuclease Inhibitor 577 908 IPR032675 -
Tsu08g01389 1200 Pfam NB-ARC domain 199 426 IPR002182 GO:0043531
Tsu08g01389 1200 Gene3D - 425 512 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01389 Tsu-Chr8 16208666 16237780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01389 208 726 WRKY Transcription Factor Family AT5G45050 25.455 7.75e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01389 - - gmx:100781012 1280.77