Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01362 ATGGCGGTCGAATTTGTTGGTAGTGCTCTTCTTTCAGCTTCTCTTCAGGTTGCATTTGACAGGCTAGCTTCTGTTGAAGTTGTGGATTACTTTCAAGGAAGAAAATTCAATGATAAGCTTCTGAAGAAACTTAACATCACGCTTCTCTCCATCAACGCTGTGATCGACGATGCAGAACAAAAGCAGATCAGAAATCAACACGTGAAAGTATGGCTCGATGCTGTCAAAGATGCTGTGTTCGAAGCAGAAGATCTATTAGATGAAATTGACATTCAAGTCACTCAATGCAAACTCGAAGCTGAATCTCAATCTAGTCCTAACAAGGTATGGAACTACTTCAATGCTTCTACAAATTCATTTGGCAAAGAAATTGAATCAAAGATGCAAGAAGTACTTGAAAATCTAGAATATCTTTCTAGCAAAAAGGATATACTAGGTTTGAAAGAGGCTAGTACTAGTAGTGGTTTTAGTGTTAGATCGGGTAGTCAAGTGTCGCGAAAATTGCCAACAACTTCTTTGCTTGGTGAAACTGTTTTATATGGTAGAGATGTTGACAAACAAATTATACTTAATTGGTTGAAATCTCACACTGATAATGAAAAGCAGTTTTCCGTAGTTTCAATTGTCGGTATGGGTGGGATGGGTAAGACTTTGCTTGCTCAACACATATATAATGATTCGAAGATGGAGGATGAATTTGATGTCAAAGCTTGGGTCTGTATTTCAGACGAATTCGATGTTTTCAAGATAACTAGAGCTATTCTTGAGGGTATCAATGGAGCAATCGATGATAGTAGAGATCTAAATATGGTTCAAGAAAGGTTGAAAGAAAAATTGACAGGAAAACGATTTCTTCTTGTTTTGGATGATATTTGGAATGAAAACCGTGATCAATGGGAAGCTTTGCAAACTCCTTTTAATTACGGAGCTCGAGGAAGCAAAATTATCGTTACTACACGGAATTTGAAAGTTGTGTCAACCATACGGTCAACTAGATTTCATCATCTCGAGCAATTGCAAGAAGAACATTGCTTGCAATTGTTTTCAAGACATGCATTCCAAGATGAAAATCCTCGATCGAATCCCGAGTTGATGGAGATTGGTAAAAAGATAATTGCAAAATGTAAAGGATTGCCTCTATCCTTGAAAACAATTGGAAGTCTTTTATACACAAAATCATCTTTGGTAGaatggaaaaatattttgtcaagtGAGATATGGGACTTACCTGAAGAGGTTAGCAATATTGTCCCCGCTTTAAGACTCAGCTATGACCACCTTCCTTCTCATTTGAAGAGATGTTTTTCTTGTTGTTCTCTATTCCCAAAAGATTATGTATTTGAAAAGgaacaattaattttaatatggatGGCTGAAAATTTTCTACAATGTCCTCAAGCTCAACAGACTAAGAGTATGTTAGAAGTTGGCGAACAATACTTTGATGATCTGTTATCGAGGTCATTTTTTCAACAATCAACCGAGgacaaaatgtgttttgtcaTGCATGATCTTCTCAATGATATGGCAAAATATGTATGTGGGGATTTTTATTTCAGGTTGGAAGTTGATGAAgcacaaaatatatcaaaagtTACTCGTCATTTTTCGTTCTTGAGATATAGATATGAATCTTCCAAAAGGTTTGAGGCCTTATGTCAAGCTGAAAGATTGCGTACATTTCTACCATTTACCAGGAACCACAAACGCAAAGTACCATCTTTTCTTAACGAATTCTGGATGTCTGGCCCTTTGTTGCATGACTTGCTCCCCAAGTTTAAGCGTTTACGCATTTTATCTTTGTCTGGATATTACAATATGATTGAGGTTCCTAACACTGTAGGAAATCTTAAACATCTCCGTTATCTTGACCTTTCTGATACCAACATAAAAAAGCTACCTGATTCAATATGTTTTCTCTTTAACTTGCAAATACTGAAGTTGAAGAATTGCCGATATTTGAAGGAGCTGCCTTTGAATTTTCATAAACTCACTAATTTGTGTTATCTTGATTTTAGTGGAACAAATGTGAGGAATATGCCAATTCATTTTGGAAAATTGAAGAACCTTCAAGTATTGAATTCATTTTGTGTCGGAAAAAGTAGCGACTGTGACTGCAATATTCAACAGTTAGGTGAACTCAATCTTCACGGATCACTATCGATTTCAGAGTTACAGAATACGGTTAATCCCTTTGATGCATCAGCATCAAATTTGAAAGATAAAATACACCTTGTGAAGCTAGAGTTAGAATGGAATGCAAACGATGAAAACTCACAGCAAGTAAGGGAAGTGCTTGAGAACCTACAACCTTCAAAACACTTGAAGGAGTTGTCAATCAGGAGCTATGGTGGAACAAGATTTCCAGATTGGTTTGGAGATAATTCTCTATCTAATCTAGTGTCCTTGAGGTTGAGTAACTGTGAAAAATGTCTCTTGTTGCCTCCACTTGGAATTTTACCTTCTCTCAAGAAACTATGCATTATAGGGCTCTATGGTTTAGTGGTTATTGGCACCGAGTTTTATGGAAGTAACTCTTCAACTGTTCCATTTCCATCTTTGGAAACTTTGCAATTTGAGGATATGCCGGAATGGGAAGAATGGGAATGCAAAACTGCGACAAATGTTTTTCCATGTCTTCGAAACCTTTCTATAAAATATTGTCCAAATCTGAGAGAGAATTTGCCAGAGAAGCTTCCTTGTTTACTAAACCTAGAAATTTCTAATTGTGAACAACTTGTGGCTTCTATTCCTTGGACTCCATCTATTCATGAATTGCATCTAAATGATTGCGGAAATCTGCAATTTGATTA 2813 0.3566 MAVEFVGSALLSASLQVAFDRLASVEVVDYFQGRKFNDKLLKKLNITLLSINAVIDDAEQKQIRNQHVKVWLDAVKDAVFEAEDLLDEIDIQVTQCKLEAESQSSPNKVWNYFNASTNSFGKEIESKMQEVLENLEYLSSKKDILGLKEASTSSGFSVRSGSQVSRKLPTTSLLGETVLYGRDVDKQIILNWLKSHTDNEKQFSVVSIVGMGGMGKTLLAQHIYNDSKMEDEFDVKAWVCISDEFDVFKITRAILEGINGAIDDSRDLNMVQERLKEKLTGKRFLLVLDDIWNENRDQWEALQTPFNYGARGSKIIVTTRNLKVVSTIRSTRFHHLEQLQEEHCLQLFSRHAFQDENPRSNPELMEIGKKIIAKCKGLPLSLKTIGSLLYTKSSLVEWKNILSSEIWDLPEEVSNIVPALRLSYDHLPSHLKRCFSCCSLFPKDYVFEKEQLILIWMAENFLQCPQAQQTKSMLEVGEQYFDDLLSRSFFQQSTEDKMCFVMHDLLNDMAKYVCGDFYFRLEVDEAQNISKVTRHFSFLRYRYESSKRFEALCQAERLRTFLPFTRNHKRKVPSFLNEFWMSGPLLHDLLPKFKRLRILSLSGYYNMIEVPNTVGNLKHLRYLDLSDTNIKKLPDSICFLFNLQILKLKNCRYLKELPLNFHKLTNLCYLDFSGTNVRNMPIHFGKLKNLQVLNSFCVGKSSDCDCNIQQLGELNLHGSLSISELQNTVNPFDASASNLKDKIHLVKLELEWNANDENSQQVREVLENLQPSKHLKELSIRSYGGTRFPDWFGDNSLSNLVSLRLSNCEKCLLLPPLGILPSLKKLCIIGLYGLVVIGTEFYGSNSSTVPFPSLETLQFEDMPEWEEWECKTATNVFPCLRNLSIKYCPNLRENLPEKLPCLLNLEISNCEQLVASIPWTPSIHELHLNDCGNLQFD 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01362 937 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 438 IPR027417 -
Tsu08g01362 937 Pfam Rx N-terminal domain 11 104 IPR041118 -
Tsu08g01362 937 Coils Coil 41 61 - -
Tsu08g01362 937 Gene3D - 161 333 IPR027417 -
Tsu08g01362 937 CDD AAA 184 319 - -
Tsu08g01362 937 PANTHER OS05G0414200 PROTEIN 17 898 - -
Tsu08g01362 937 Gene3D - 16 134 - -
Tsu08g01362 937 PANTHER DISEASE RESISTANCE PROTEIN RP 17 898 IPR044974 GO:0006952
Tsu08g01362 937 SUPERFAMILY L domain-like 501 923 - -
Tsu08g01362 937 Gene3D - 338 428 IPR042197 -
Tsu08g01362 937 PRINTS Disease resistance protein signature 615 631 - -
Tsu08g01362 937 PRINTS Disease resistance protein signature 205 220 - -
Tsu08g01362 937 PRINTS Disease resistance protein signature 278 292 - -
Tsu08g01362 937 PRINTS Disease resistance protein signature 375 389 - -
Tsu08g01362 937 ProSiteProfiles Leucine-rich repeat profile. 619 640 IPR001611 GO:0005515
Tsu08g01362 937 Pfam NB-ARC domain 189 425 IPR002182 GO:0043531
Tsu08g01362 937 Gene3D Ribonuclease Inhibitor 574 936 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01362 Tsu-Chr8 15722857 15725669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01362 206 448 WRKY Transcription Factor Family AT5G45050 28.571 6.01e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01362 - - gmx:100781012 1066.22