Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01351 ATGGACGAAGATTTTGGCATTCCGGCggttgatgaaatgaaagaagattTCAAATTCGTCGGAGCTGAAGGTAATCCAACTCTCAAGGTCGGTGAAGAGAAGGAGATCGGATGTTGCTTTGTGCGCAATGGTATTGAGGCTAAGCAGCCCAACTCTGCTATTCGGAAATGTGCCCGAGTTCAACTCATTAAAAATGGGAAGAAGATAGCTGCCTTTGTGCCAAATGATTGTTTGAATTGCATCGAAGAGGATGATTTGGACGTAAAGGTCATGCCGTGGGTGATATTCCTGGTGTCAGATTCAAGGTTGCGAAGGTTTCTGGTGTCTCTATCCTTGCTCTTTTCAAGGAGAAGCCCAGATTTGTTTGAAGAGGCTAGGACTATATTGGAAAAGGAGTATGCTCCTTATCATCCTCATGCTTTAGGAGTCTATAGCAATCTTGCAGTTACTTGGGgatattattgtatttatcaCCCATGTAGTAGTTACTTGGGGATATTATTTCATTAG 510 0.4039 MDEDFGIPAVDEMKEDFKFVGAEGNPTLKVGEEKEIGCCFVRNGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDCLNCIEEDDLDVKVMPWVIFLVSDSRLRRFLVSLSLLFSRRSPDLFEEARTILEKEYAPYHPHALGVYSNLAVTWGYYCIYHPCSSYLGILFH 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01351 169 SUPERFAMILY Nucleic acid-binding proteins 37 84 IPR012340 -
Tsu08g01351 169 ProSitePatterns Ribosomal protein S12 signature. 48 55 IPR006032 GO:0003735|GO:0005840|GO:0006412
Tsu08g01351 169 Pfam Ribosomal protein S12/S23 34 85 IPR006032 GO:0003735|GO:0005840|GO:0006412
Tsu08g01351 169 Gene3D - 20 93 IPR012340 -
Tsu08g01351 169 PANTHER 40S RIBOSOMAL PROTEIN S23-1-RELATED 44 89 - -
Tsu08g01351 169 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 44 89 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01351 Tsu-Chr8 15579475 15581619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01351 30 85 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 73.684 1.34e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01351 K02973 - oeu:111404096 80.8777