Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01327 ATGGTGAAGGAAACTGCATACTATGATACATTAGGTGTTAGTGTTGATGCATCTGCTGCAGATATCAAGAAAGCTTATTATGTTAAGGCAAGAATAGTTCACCCTGATAAAAATCCAGGGGATCCTACGGCTGCAGCAAATTTTCAGCTGCTTGGCGAGGCCTACCAGGTTTTAAGCGATCCTGAGAAGCGTGAAGCATATGACAGGAATGGAAAGGCAGGAGTGTCTGAAGATTCCATGATGGATCCTACAACTGTATTTGGAATGCTTTTTggaagtgatttttttgaagaatatattgGAAAACTTGCACTTGCTAATTTAGCATCTATAGAAGTTGAGGAAGAAGCATCATCAGATATTCAAGTTCGTCTGCAGAGAATTCAAGAAAAGATGAAAGCATGGCAGAAGGAAAGAGAACTGAAGCTGATAACAATTCTGAAAGACCGTCTCCAACCATTTGTTGAGGGTCGAGAAGAAGAATTTACAGCATGGGGAAATTCTGAAGCTAGAAATCTTTCAAAAGCTGCTTTTGGAGAGGCCATGCTACATACAATTGGTTATATCTACACACGAAAAGCAGCAAGAGAACTAGGAAAGGATATCCGGTTCATGAACGTTCCCTTCTTGGCAGAGTGGGTACGAGACAAAGGACACCGTATTAAGTCACAAGTAACGGCAGCCTCAGGAGCCGTGACCCTAATTCAAATACAAGAAGAGCTCAAGAAGCTAAATCAAggagaaaataaagaagaaaacatAATGAAAGCTCTTGAAGATAAGAAGGATACCATGGTTAATTCCTTATGGCAGATAAATGTGATTGATATTGAATCTACTCTTTCACATGTTTGTCAAGCAGTTCTTAAGGATCCTACCGTGTCCAAAGATGTTCTTAAGGCTCGGGCCAAAGCGTTGAAAATGTTAGGAACCATCTTTCAAGGTGCTAAGGATGCTTTTAGGAGAGAAAACAGTCTACGCCAAGAAAATGACAAACTGGTTGCTTCTGGTTCCTCATCATAG 1023 0.391 MVKETAYYDTLGVSVDASAADIKKAYYVKARIVHPDKNPGDPTAAANFQLLGEAYQVLSDPEKREAYDRNGKAGVSEDSMMDPTTVFGMLFGSDFFEEYIGKLALANLASIEVEEEASSDIQVRLQRIQEKMKAWQKERELKLITILKDRLQPFVEGREEEFTAWGNSEARNLSKAAFGEAMLHTIGYIYTRKAARELGKDIRFMNVPFLAEWVRDKGHRIKSQVTAASGAVTLIQIQEELKKLNQGENKEENIMKALEDKKDTMVNSLWQINVIDIESTLSHVCQAVLKDPTVSKDVLKARAKALKMLGTIFQGAKDAFRRENSLRQENDKLVASGSSS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01327 340 Pfam DnaJ domain 7 68 IPR001623 -
Tsu08g01327 340 Gene3D DnaJ domain 1 87 IPR036869 -
Tsu08g01327 340 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 333 - -
Tsu08g01327 340 CDD DnaJ 7 60 IPR001623 -
Tsu08g01327 340 PRINTS DnaJ domain signature 43 63 IPR001623 -
Tsu08g01327 340 PRINTS DnaJ domain signature 8 26 IPR001623 -
Tsu08g01327 340 PRINTS DnaJ domain signature 63 82 IPR001623 -
Tsu08g01327 340 PRINTS DnaJ domain signature 26 41 IPR001623 -
Tsu08g01327 340 Coils Coil 111 138 - -
Tsu08g01327 340 Pfam X-domain of DnaJ-containing 136 328 IPR026894 -
Tsu08g01327 340 PANTHER BNAA01G05380D PROTEIN 1 333 - -
Tsu08g01327 340 Coils Coil 241 261 - -
Tsu08g01327 340 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Tsu08g01327 340 SUPERFAMILY Chaperone J-domain 2 100 IPR036869 -
Tsu08g01327 340 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Tsu08g01327 340 SMART dnaj_3 5 63 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01327 Tsu-Chr8 15119949 15127990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01327 7 68 Miscellaneous Gene Families AT1G16680 48.438 3.50e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01327 - - gmx:100787075 553.518