Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01322 ATGCCGCAAAACAATAATGTTCGCGCAATGCCGCGAATCAATATTCCTGATGCTGTTGTGGAAAATGTAAACAACCCTCCAGATATACCAATGATTCTTGGCGTACCGaataataatattcttcaaTGCTACAAgccttttgagaaaaaattatcaaagagTGATTTGAAGGTGGATCAGAATAGATTGTTTATGAACAAGAGTCATGTGAAAAACTATTTCACGCCCTTATTGAGAGAAGGTGAAGAAAAAGTTGTAGATGGAATAAACGTTATTGCATATGACATGCAAGGCAAAACGTTCAATATGAAGTTCATATTTTGGAGTGAAAAAATTTATGTCCTCACTGGATCTGGGTGGAAGAAGTTCTTTGNAAGAACATTTTTTGCAAGCGAATCAAGATCTTGTTAA 411 0.3285 MPQNNNVRAMPRINIPDAVVENVNNPPDIPMILGVPNNNILQCYKPFEKKLSKSDLKVDQNRLFMNKSHVKNYFTPLLREGEEKVVDGINVIAYDMQGKTFNMKFIFWSEKIYVLTGSGWKKFFXRTFFASESRSC 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01322 136 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 25 125 - -
Tsu08g01322 136 SUPERFAMILY DNA-binding pseudobarrel domain 46 125 IPR015300 -
Tsu08g01322 136 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 25 125 IPR005508 GO:0003677
Tsu08g01322 136 CDD B3_DNA 47 124 IPR003340 GO:0003677
Tsu08g01322 136 Gene3D - 38 127 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01322 Tsu-Chr8 15065455 15065865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01322 45 123 B3 DNA Binding Superfamily AT1G20600 41.250 1.67e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01322 - K00036 mtr:MTR_3g013810 126.716