Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01296 ATGTTACAGTCTATAGTGGCACTCTCTACTACGGAAGCTGAGTACATGACAGTAGCAGAAGAAGTAAAGGAAACATTGTGGCTGAGGGGTCTTCTAAGTGATTTGGGTGTTGAGCAAGAACGCGTGAGATTGATGTGTGATAGTCAAAGTGCAATTCATTTGGCTAAAAATCAGTGGCATATGTTGAGACATGGATCTCAAACCAGAAAAGGACCAGATTCTCTAAAAGGAACAACAAAGCCTTCCATGTCAAGGCTTCCATGTTTTTGTTGTGCACCAGGTTGCAGGCGCAACATTGATCACCCTAGAGCAAAGCCTTTTAAAGATTTTAGAAATCTTCAAACACATTATAAGAAAGTGGCTTCTAAGGTGAAGTTTCAATTAAATTCTTCACCGATAAACCACTATCATGAGACCATCagatttgaaattctggcgtag 441 0.3832 MLQSIVALSTTEAEYMTVAEEVKETLWLRGLLSDLGVEQERVRLMCDSQSAIHLAKNQWHMLRHGSQTRKGPDSLKGTTKPSMSRLPCFCCAPGCRRNIDHPRAKPFKDFRNLQTHYKKVASKVKFQLNSSPINHYHETIRFEILA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01296 146 CDD RNase_HI_RT_Ty1 2 58 - -
Tsu08g01296 146 PANTHER ZINC FINGER PROTEIN WIP2 44 120 IPR043584 GO:0003700|GO:0010468
Tsu08g01296 146 PANTHER OS09G0282100 PROTEIN 44 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01296 Tsu-Chr8 14685597 14687104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01296 58 126 C2H2 Transcription Factor Family AT1G51220 68.116 1.14e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01296 - - gmx:100794446 109.383