Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01280 ATGACAGAGACCCTCTTGTTTTTGCTACTCATTCTCTCACTCTTCATCATAGCTTACACAATAATCTTcttcaccaccaccacaacaacCACCGTTCTCCGCCTTCCACCAAGTCCACCATCAATCCCTCTAATAGGCCACCTCCACCTCCTCACTCCATCCCTTTACAAATCCTTCCACTCCATCTCCACCAAACATGGCCCTCTCCTCCACCTCCGTCTTGGTCCCTCACGCGGCCTCCTGCTCGTCTCCTGTGCCTCTTCCGCCGCCTCCATCTTCAAAACAAATGACCTTGCCTTCTCTTCCCGACCGACATTTGCATTCGCAGACAGACTTCCTTATGGTACATCCGGCTTTGTAACCGCTCCTTATGGCACGTACTGGCGTTTCATGAAGAAGTTATGCATGACAGAACTGCTGAGTGTCCGACAATTGGAGCGGTCGATGAGCATAAGAAGAGATGAGATTCAGCGTTCGGTGAAAAGGGTGCTGGAGAATGCTGGTGTTGCTACTGCTGTTGATTTGGGTGCTGAGCTCATGAAGTTCACCAACAATGTTACTTGTAGAATGGCCATGAGCACCAGGTGTTCAGAGAAATGTGAGGATGCTGAGAAGATTAGGAAGTTAGTGAAGGAATCCTTTGAGCTAGCTGCCAAGTTGTGCTTTGGGGATGTGTTGGGTCCTTTCAAACAGTTGACATTTTGGATTTATGGGAAACAGGCTATGGATGTTAGTAGAAGGTATGATGAATTATTGGAGAAGGTGCTGAAGGAGCATGAAGACAAAAGATCATCATCACATAGAAATGGTGATGAAAATGAAAGGGATTTAATGGATATTCTGTTGGATGTTTATCATGATGCTCATGCTGAGTTCAAGATCACAAGGACTCATATCAAAGCCTTCTTTTTGGATCTATTCATTGGAGGCACAAACACCTCAGCAGAAGCTATGCAATGGGCAATGGCTGAGCTCCTTAACCATCCTGAAGTATTCCACAAGGTAAGAAATGAGATAGAGTCAGTCACACAAAATGTTAGGCTAGTTGAAGAATCAGATATCCCAAACATGCCATATTTACAAGCAGTGGTAAAAGAAACACTGAGACTTTATCCACCTGCACCAGTAACAACAAGAGAATGCAACCAAGACTGCAAAATTAATGGCTTTGATATACCAGCAAAAACAGCAGTAGCAATCAATTTATATGCTATAATGAGGGATGCAGAAATTTGGGAAGATCCAAATGAATTTCAACCTGAAAGGTTCttcaaagaaaaagatgatCCAAGTAGTGATCATGATCATGATTATCAGAATGATGCTAAAAGAATGGAGTTCAATTTTGTTCCATTTGGAGCAGGAAGGAGAGGGTGTCCAGGGACAGCACTGGCATTTAACTTGATGAACACTGCTGTTGCTGCTATGGTTCAGTGCTTTGATTGGAAAATTGGTGAAGATGGAAAAGGAGAAAAGGTTGATATGCAATCTGGTTCTGGCATGTCTTTAGGCATGGTTCATCCACTTATTTGTATTCCTGTTGTACATTTTAATCCATATGATGAATAA 1569 0.4207 MTETLLFLLLILSLFIIAYTIIFFTTTTTTTVLRLPPSPPSIPLIGHLHLLTPSLYKSFHSISTKHGPLLHLRLGPSRGLLLVSCASSAASIFKTNDLAFSSRPTFAFADRLPYGTSGFVTAPYGTYWRFMKKLCMTELLSVRQLERSMSIRRDEIQRSVKRVLENAGVATAVDLGAELMKFTNNVTCRMAMSTRCSEKCEDAEKIRKLVKESFELAAKLCFGDVLGPFKQLTFWIYGKQAMDVSRRYDELLEKVLKEHEDKRSSSHRNGDENERDLMDILLDVYHDAHAEFKITRTHIKAFFLDLFIGGTNTSAEAMQWAMAELLNHPEVFHKVRNEIESVTQNVRLVEESDIPNMPYLQAVVKETLRLYPPAPVTTRECNQDCKINGFDIPAKTAVAINLYAIMRDAEIWEDPNEFQPERFFKEKDDPSSDHDHDYQNDAKRMEFNFVPFGAGRRGCPGTALAFNLMNTAVAAMVQCFDWKIGEDGKGEKVDMQSGSGMSLGMVHPLICIPVVHFNPYDE 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01280 522 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01280 522 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01280 522 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01280 522 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01280 522 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01280 522 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01280 522 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 520 - -
Tsu08g01280 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Tsu08g01280 522 Gene3D Cytochrome P450 29 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01280 522 PANTHER CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 25-RELATED 7 520 - -
Tsu08g01280 522 SUPERFAMILY Cytochrome P450 33 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01280 522 Pfam Cytochrome P450 36 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01280 522 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01280 522 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01280 522 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01280 522 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01280 Tsu-Chr8 14424869 14427637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01280 1 520 Cytochrome P450 AT2G42250 47.510 2.76e-169 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01280 K23814 - gmx:100790065 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01280 08 14424869 14427637 Tsu08g01280 08 14424869 14427637 ECH