Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01259 ATGtCTGTTACTCTTCACACAAACCTAGGTGACATCAAATGCGAAATCTTCTGCGACGAGGTCCCTAAAACCTCTGAGAATTTTTTAGCGCTGTGTGCGAGTGGTTACTATGATGGGACTATATTTCACCGCAATATTAAAGGCTTTATGATTCAAGGTGGAGACCCAACTGGTACTGGCAAGGGAGGGACTAGTATATGGGGAAAGAAGTTCAACGACGAGATAAGAGAATCATTGAAGGTGAGTTCATCTTCCGTGCTAATTACTATGAAGCCATGTTTTCAGGGTTATGCCTGCTTTTTGTCGTATTTGTTAGGTATGTAA 324 0.4167 MSVTLHTNLGDIKCEIFCDEVPKTSENFLALCASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKVSSSSVLITMKPCFQGYACFLSYLLGM 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01259 107 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 80 IPR002130 GO:0000413|GO:0003755
Tsu08g01259 107 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 87 IPR044666 -
Tsu08g01259 107 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 IPR002130 GO:0000413|GO:0003755
Tsu08g01259 107 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 IPR002130 GO:0000413|GO:0003755
Tsu08g01259 107 SUPERFAMILY Cyclophilin-like 1 83 IPR029000 -
Tsu08g01259 107 Gene3D - 1 93 IPR029000 -
Tsu08g01259 107 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 37 54 IPR020892 GO:0003755|GO:0006457
Tsu08g01259 107 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 3 2 87 - -
Tsu08g01259 107 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 6 101 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01259 Tsu-Chr8 14102114 14103531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01259 3 103 U-box Gene Family AT5G67530 49.515 4.86e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01259 K12734 - ini:109179998 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01259 08 14102114 14103531 Tsu08g01259 08 14102114 14103531 ECH