Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01257 ATGAAGTGGGTTAAACTAAGTCGTGGAAGGTACAAATGCAACATCGACGCTTTATTCTCTTCTACTCACAACAAAGTTCAAATAGTTATGTATATAAGGGATGATCATGGAAGGTACGTGGCTGCAAGAACCGAATGGTTAGAACTTATTATCGATGTGGAGCTCGGAGAAACTATGAGGCCATTAAGTGTATTGAAGTGGGTGGAAGAATTACAACTAAGAGACATGAATTTTGTGATGGATTGTAAAAGGGAAAAGAAAAAGCTCATGTTATTCTTCACAATGGAAGCTAAACCTCTTCAAATTGTTCCCTCTCCACACAACAACACAACCGGAGGAGGTGGACCCCAGAAGAAGATTGATGagaatgaaaatgttgttgtagtgaagaaagagaaagaagaaaaccCTTTGATCACACAAGTTCAAAGGCGTGAGCTTGATCATCAAGTTTTCATCTTTAATCACTTTGCTTATAACCTTCCTCTTCCTTATTACCTTTTGCAATTTCCAACTAATATGTCAGAGTTCGGCCGTCTAGGTTCTGATCACGTGACTATGGTGGATACAGAACCACATAGGTGTAGAAGAACCGATGGAAAGAAATGGAGGTGTGGTAAAAACACAGTACCTAATCAGAAGTACTGCGAACGTCACATGCATAGGGGTCGAAATCGTTCAAGAAAGCTTGTGGAAACATCTCAACGTAACTCTCCTAATTTGAAAACAAAGCCTAGTATTGGTGGCAAGTCACATGCAAAACTAGTCCCTAACATTGAATCTATTGTTTCAAATCCAAACCCTTTTGTCATTCAACACCGTGACACATTCTCATACACCCCATCGAGGAGCTTCTGTATTGTAAATACATCTTCTGGTTGTGATCGGTCGAGAAATGTCATAGGTTCTGATGTCTCTGTGGTGACTCCTTGCTCCGTTCTTGCGCCTGCAGTTGCACCTAAGATGACCACTTTCAGCAGCATGATGGCATCACTTACTTCGGATGACCGAAGTCGTCTTAATGTATGCAAGCAAGATGAGCAGATCAAGATGTCTATCAACAACAACACGAGTATTAAAAGTTGTACGAAAGGAAGCAATTCATGTGAAATTAATAGCATCTCTACTGGAATGGACTTCTCCCCAAAGAGTGTTCTTCAAGTTTCTGGTTGCAATTATTCATACCTCAACGACAGAAACAGTATAACAATAGAACCTGAACCTGGCAGATGCCGAAGAACAGACGGTAAGAAGTGGCGGTGCAAGAGTGCGGTTCTTCCTGGTCAGAAATATTGTGCAACACATATGCATAGAGGTGCGAAAAGGCGTTTTATAAACCATGaacctcctcctcctcctgcCGCCGATGCTACTACTACAACTACTACTGCTAGTTCTTCTGTTACCATTGCTTGGTTGTCTAACCTTTCAGCGGAAACCTCAACAGACATTCAGAAAGCGTATTGTGAAATTCCAAACACAAAGCTTTCAATGTCGGTTCCAGACAGTGCACCCTTTGCAGAATGCAACGAGAAAAGTGGTGGCAGCAGTGACACTGAAACTAGTACCACTGTCACTGACACCATCAATGACTATCTTTCTTTCTAA 1608 0.3993 MKWVKLSRGRYKCNIDALFSSTHNKVQIVMYIRDDHGRYVAARTEWLELIIDVELGETMRPLSVLKWVEELQLRDMNFVMDCKREKKKLMLFFTMEAKPLQIVPSPHNNTTGGGGPQKKIDENENVVVVKKEKEENPLITQVQRRELDHQVFIFNHFAYNLPLPYYLLQFPTNMSEFGRLGSDHVTMVDTEPHRCRRTDGKKWRCGKNTVPNQKYCERHMHRGRNRSRKLVETSQRNSPNLKTKPSIGGKSHAKLVPNIESIVSNPNPFVIQHRDTFSYTPSRSFCIVNTSSGCDRSRNVIGSDVSVVTPCSVLAPAVAPKMTTFSSMMASLTSDDRSRLNVCKQDEQIKMSINNNTSIKSCTKGSNSCEINSISTGMDFSPKSVLQVSGCNYSYLNDRNSITIEPEPGRCRRTDGKKWRCKSAVLPGQKYCATHMHRGAKRRFINHEPPPPPAADATTTTTTASSSVTIAWLSNLSAETSTDIQKAYCEIPNTKLSMSVPDSAPFAECNEKSGGSSDTETSTTVTDTINDYLSF 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01257 535 MobiDBLite consensus disorder prediction 510 527 - -
Tsu08g01257 535 ProSiteProfiles QLQ domain profile. 138 173 IPR014978 GO:0005524|GO:0005634|GO:0006355
Tsu08g01257 535 MobiDBLite consensus disorder prediction 500 527 - -
Tsu08g01257 535 PANTHER - 391 482 IPR031137 GO:0005634|GO:0006351|GO:0032502
Tsu08g01257 535 Pfam WRC 406 443 IPR014977 -
Tsu08g01257 535 Pfam WRC 191 232 IPR014977 -
Tsu08g01257 535 PANTHER GROWTH-REGULATING FACTOR 9 123 348 - -
Tsu08g01257 535 PANTHER GROWTH-REGULATING FACTOR 9 391 482 - -
Tsu08g01257 535 MobiDBLite consensus disorder prediction 223 250 - -
Tsu08g01257 535 ProSiteProfiles WRC domain profile. 405 454 IPR014977 -
Tsu08g01257 535 PANTHER - 123 348 IPR031137 GO:0005634|GO:0006351|GO:0032502
Tsu08g01257 535 ProSiteProfiles WRC domain profile. 189 233 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01257 Tsu-Chr8 14089021 14093118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01257 137 443 GRF Transcription Factor Family AT2G45480 30.548 1.46e-34 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01257 - - mtr:MTR_8g035910 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01257 08 14089021 14093118 Tsu08g01257 08 14089021 14093118 ECH