Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01253 ATGGATGAAAATGCAAAACGTGAATGGTCCATCAACGACTTCGAGATCGGAAAGCCACTCGGTAGAGGCAAATTCGGCAGAGTCTACGTCGCCAGAGAAATCAAGAGTAAACATGTGATTGCATTGAAGGTAATATTTAAGGAACAACTAGAAAAGTATGAAATTCACCATCATCTAAGGAGGGAAATGGAGATACAAATAAGTCTTAATCATCCAAACATCTTGCGTCTCTATGGTTGGTTTGATGATGCCGAGCGTGTTTTCTTGATTCTTGAATATGCGCATAATGGTGAGCTATACAAAGAGCTTCGCAAAAGAGCCTCACAAAGGCATTGGCATATTGTCACAACTCACGAGAAGCATGTTATTCACAGGGACATCAAGTCAGAAAATTTGTTGCTTGACCATGAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCTGTACAATCTAAAAGCAAAAGACAAACCATGTGTGGAACATTGGATTATCTAGCTCCTGAAATGGTAGAACACAAATCTCATGATCATGCAGTTGATAATTGGACTCTGGGTATCCTTTGTTATGAGTTCCTCTATGGTGCTCCTCCATTTGAGGCTGAGAGTCAAGAGGATACCTTCAAAAGGATAAGAAATGTTGATCTGAACTTCCCTCCAGCCCCTCTTATTTCTAAAAATGCCAAAAATCTGATAACTCGGCTCTTGGTAAAAGATTCTTCAAAAAGGCTTTCACTTCAGAAGATAATGGAGCATCCTTGGATAAAAGAGAATGCAAATCATATGGGTGTTTGTCACTAG 798 0.3997 MDENAKREWSINDFEIGKPLGRGKFGRVYVAREIKSKHVIALKVIFKEQLEKYEIHHHLRREMEIQISLNHPNILRLYGWFDDAERVFLILEYAHNGELYKELRKRASQRHWHIVTTHEKHVIHRDIKSENLLLDHEGRLKIADFGWSVQSKSKRQTMCGTLDYLAPEMVEHKSHDHAVDNWTLGILCYEFLYGAPPFEAESQEDTFKRIRNVDLNFPPAPLISKNAKNLITRLLVKDSSKRLSLQKIMEHPWIKENANHMGVCH 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01253 265 SMART serkin_6 14 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01253 265 ProSiteProfiles Protein kinase domain profile. 14 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01253 265 Gene3D Transferase(Phosphotransferase) domain 1 101 263 - -
Tsu08g01253 265 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Tsu08g01253 265 CDD STKc_Aurora 13 255 - -
Tsu08g01253 265 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 4 263 IPR030616 GO:0004672
Tsu08g01253 265 SUPERFAMILY Protein kinase-like (PK-like) 7 257 IPR011009 -
Tsu08g01253 265 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Tsu08g01253 265 Pfam Protein kinase domain 14 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01253 265 ProSitePatterns Protein kinases ATP-binding region signature. 20 47 IPR017441 GO:0005524
Tsu08g01253 265 PIRSF ILK 2 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01253 Tsu-Chr8 14025063 14027338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01253 14 257 CBL-interacting serine-threonine protein kinases AT5G10930 36.015 8.43e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Tsu08g01253 Pkinase 2.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01253 K08850 - gmx:100775802 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01253 08 14025063 14027338 Tsu08g01253 08 14025063 14027338 ECH