Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01252 ATGGATGAAAATGCAAAACGTGAATGGTCCATCAACGACTTCGAGATCGGAAAGCCACTCGGTAGAGGCAAATTCGGCAGAGTCTACGTCGCCAGAGAAATCAAGAGTAAATATGTGATTGCATTGAAGGTTATATTTAAGGAACAGCTAGAAAAGTATAAAATTCACCATCAACTGAGGAGGGAAATGGAGATACAAATAAATCTTAAACATCCAAACATCTTGCGTCTCTATGGTTGGTTTGATGATGCGGAGCGTGTTTTCTTGATTCTTGAATATGCTCATAACGGTGAGCTATACAAAGAGCTTCGCAAAAGAGGTCATTTCTCAGAGAAACAAGCTGCAACGTACATTTTAAGCCTCACCAAGGCATTGGCATATTGTCATGAGAAGCATGTTATTCACAGGGACATCAAGCCTGAAAATTTGTTGCTTGACCATGAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCTGTACAATCTAAAAGCAAAAGACAAACCATGTGTGGAACATTGGATTATCTAGCTCCTGAAATGGTAGAACACAAATCTCATGATCATGCAGTTGATAATTGGACTCTGGGTATCCTTTGTTATGAGTTCCTCTATGGTGCTCCTCCATTTGAGGCTGAGAGTCAAGAGGATACCTTCAAAAGGATAAGAAATGTCGATCTGAACTTTCCTCCTGCCCCTCTTATTTCTAAAAATGCCAAAAATCTGATAACTCGGCTCCTGGTAAAAGATTCTTCAAAAAGGCTCTCACTTCAGAAGATAATGGAGCATCCTTGGATAAAAGAGAATGCAAATCATATGGGTGTTTGCGAGTAG 831 0.4019 MDENAKREWSINDFEIGKPLGRGKFGRVYVAREIKSKYVIALKVIFKEQLEKYKIHHQLRREMEIQINLKHPNILRLYGWFDDAERVFLILEYAHNGELYKELRKRGHFSEKQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSKSKRQTMCGTLDYLAPEMVEHKSHDHAVDNWTLGILCYEFLYGAPPFEAESQEDTFKRIRNVDLNFPPAPLISKNAKNLITRLLVKDSSKRLSLQKIMEHPWIKENANHMGVCE 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01252 276 CDD STKc_Aurora 13 266 - -
Tsu08g01252 276 Gene3D Phosphorylase Kinase; domain 1 2 96 - -
Tsu08g01252 276 Pfam Protein kinase domain 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01252 276 ProSiteProfiles Protein kinase domain profile. 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01252 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Tsu08g01252 276 SMART serkin_6 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01252 276 PIRSF ILK 2 267 - -
Tsu08g01252 276 SUPERFAMILY Protein kinase-like (PK-like) 7 268 IPR011009 -
Tsu08g01252 276 ProSitePatterns Protein kinases ATP-binding region signature. 20 47 IPR017441 GO:0005524
Tsu08g01252 276 Gene3D Transferase(Phosphotransferase) domain 1 97 274 - -
Tsu08g01252 276 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 4 275 IPR030616 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01252 Tsu-Chr8 14018512 14021795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01252 14 270 CBL-interacting serine-threonine protein kinases AT5G25110 38.403 6.88e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Tsu08g01252 Pkinase 1.9e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01252 K08850 - gmx:100775802 493.041