Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01250 atGGATGTTTTGTATACCCTGTTGACTTTCATAGCCTTATCTTTTCTAACAATTTTCCTGGCTATATGTTTCATCATGATCacaattttcaaaggaaaatcCATAGGGGACCCAAAATATGCACCTGTGAAAGGCACAGTGTTCAACCAACTTTTCTACTTCAAAAATCTCCATGATTATCATACTCAAATTGCTAAAACTCATCCAACTATAAGACTTCTTGCTCCAAATCAAAGTGAGTTGTATACCATAGATGTGAGAAATATTGAACATATATTGAAAACCAATTTTGATAAGTATTCTAAAGGTAAGTATAATCAAGATATTGTCACTGATCTTTTTGGTGAGGGGATTTTTGCTGTTGATGGTGATAAGTGGAAGCAGCAAAGGAAAGTTGCTAGCTATGAATTTTCTACAAGAGTTCTTAGAGATTTTAGTTGTTCTGTTTTTAGAAAGCATGCTGCCAAATTGGTCAAAGTTATATCACAATTTTCTCATGATGGACTTGTTTTTGATATGCAAgACTTACAAATGAGATGTGCTTTAGACTCAATATTCAAAGTTGGGTTTGGAACAGAATTGAATTGCTTAGAAGGATCAAGTAAAGAGGGAACTGAATTCATGAAGGCCTTTGATGAATCAAATGCTTTAATATATTGGCGCTATGTTGATCCAACTTGGAGCATTAAGAGGTTTCTTAACATTGGTGGTGAGGCTAAGCTTAAACGCAATATCAAATTAATAGATGAATTTGTGAATGGAGTcataaacaccaaaaaggaacaGTTGGCACTTCACCAAGATTCTAATGTTAAAGAAGACATACTATCAAGGTTTTTAATGGAGAGCAAGAAGGGCCAAACAACTATAAGTGATAAGTATTTGAGGGATATAATTCTTAACTTTATGATAGCTGGCAAAGATACCACTGCAAACACTCTTTCATGGTTCTTCTACATGCTATGTAAGAACCCTCTTGTAGAAGACAAGATTGTGCAAGAAATAAAAGATGTCACTTGTAGCAATGAAAGTAAACTCAACAACATAGATGAGTTTGTTGCCAATTTAACAGATGTTATCCTTGATAAGATGCATTATCTTCATGCAACACTCACAGAAACATTGAGATTGTACCCTGTACTCCCTCTGGATGGAAGAACTGCAGATGCACCTGATGTTCTTCCTGATGGCTATAAACTAGAAAAGGGTGATGGAGTATACTATTTGGCCTACGCTATGGGTCGAATGTCATCCATTTGGGGGGAAGATGCTGAGGAATTTCGTCCTGAAAGATGGATTAACAACGGAATTTTTCAACCCGAATCTCCATTCAAATTTGTAGCATTCCATGCTGGACCTCGTATGTGTTTAGGAAAGGACTTTGCATATAGACAAATGAAAATAGTAGCAATGGCTattcttcatttcttcaaatttaaattGGCAAATGGAATAGAAAATGTGACTTATAAGGTCATGTTTACCCTTCACTTGGACAAGGGTCTCCCTCTCACTGCAATTCCAAGGCTTCTTGCTCCTAAAAAAAGCAAGATTTACACATGTGACACAAGAAATGTTGAGCACATACTCAAAACCCAATTTCATAAATATTCGAAAGGGAAGTTTAACCATGATACTATTTTTGATCTTTTTGGTGATGGGATTTTTGCTGTTGATGATGATAAATGGAGGCACCAAAGGAAGCTTGCTAGTATTGAGTTTTCTACTAGAGTTCTTAGAGATTTTAGTTGCAATGTTTTTAGAAGGAATGCTGTTAAGTTGGTTAGAGTTGTTTTGGGGTTTTCTAATGCTGGATTGGTCTTTGATATACAAgATATATTAATGAAATGCACTTTGGACTCCATATTCAAAGTTGGGTTTGGAGTGGAATTACATTGTTTGGAGAGATCAAGCAAAGAGGCAAATGTTTTCATGGAAGCTTTTAATGATTCAAATGCTTTTGTATTCAAACGCTATTTAGACCCCTTCTGGAAATTGAAAAGGGTTTTTAATTTTGGATCAGAAGCTGCACTTAAGAAGAACATAGAAacaattgatgattttgtgCATAGTCTAATCAAGACTAAAAGGAATCTTCTATCCTTGCAAAAGGATTTTAGTGATAAAGAGGACATACTTTCAAGGTTTTTGGTAGAAAGTGAAAAGGACCCTTCAAATATGACAGATAAATATTTGAGAGATATAATTCTAAACTTTATGATTGCTGGAAAAGACACAAGTGCCAACACTTTGTCATGGTTCTTCTACATGCTTTGCAAGAACCCTCTTATACAAGAAAAAGTGGCACAAGAAGTGATAAATGTTACTTCTACTATGCAAAAAAGCCAAGTCAATTTAGATGAATTTGTGACCAATATTACTGATGCTACTCTTGACAAAATGCATTATCTTCATGCAGCATTGACAGAGACATTGAGGCTATATCCTGCTGTTCCAATGAATGGTAGGACAGCAGAAGATCATGACATCCTTCCTGATGGTTACATAGTAAATAAGGGAGAAACAGTATACTACTTGTCCTATGCTATGGGCAGAATGCCTTACATTTGGGGGGATGATGCTGAAGAATTTAAACCTGAAAGATGGCTCAAAGATGGAATCTTTCAACCTGAatcttcattcaaattcatagctTTTCATGCTGGTCCACGTATATGCTTAGGAAAGGAGTTTGCATATAGGCAGATGAAAATAGTATCAATAGCACTTATTCGATTCTTTAGGTTTAAATTGGCAAATGAAACAAATGATGTGAGATATAGAACAATGTTCACTCTTCACATTGACAAAGGCCTTCCTCTTTATGCACTTCCAAGGTGTCATGTATCTTGA 2853 0.3442 MDVLYTLLTFIALSFLTIFLAICFIMITIFKGKSIGDPKYAPVKGTVFNQLFYFKNLHDYHTQIAKTHPTIRLLAPNQSELYTIDVRNIEHILKTNFDKYSKGKYNQDIVTDLFGEGIFAVDGDKWKQQRKVASYEFSTRVLRDFSCSVFRKHAAKLVKVISQFSHDGLVFDMQDLQMRCALDSIFKVGFGTELNCLEGSSKEGTEFMKAFDESNALIYWRYVDPTWSIKRFLNIGGEAKLKRNIKLIDEFVNGVINTKKEQLALHQDSNVKEDILSRFLMESKKGQTTISDKYLRDIILNFMIAGKDTTANTLSWFFYMLCKNPLVEDKIVQEIKDVTCSNESKLNNIDEFVANLTDVILDKMHYLHATLTETLRLYPVLPLDGRTADAPDVLPDGYKLEKGDGVYYLAYAMGRMSSIWGEDAEEFRPERWINNGIFQPESPFKFVAFHAGPRMCLGKDFAYRQMKIVAMAILHFFKFKLANGIENVTYKVMFTLHLDKGLPLTAIPRLLAPKKSKIYTCDTRNVEHILKTQFHKYSKGKFNHDTIFDLFGDGIFAVDDDKWRHQRKLASIEFSTRVLRDFSCNVFRRNAVKLVRVVLGFSNAGLVFDIQDILMKCTLDSIFKVGFGVELHCLERSSKEANVFMEAFNDSNAFVFKRYLDPFWKLKRVFNFGSEAALKKNIETIDDFVHSLIKTKRNLLSLQKDFSDKEDILSRFLVESEKDPSNMTDKYLRDIILNFMIAGKDTSANTLSWFFYMLCKNPLIQEKVAQEVINVTSTMQKSQVNLDEFVTNITDATLDKMHYLHAALTETLRLYPAVPMNGRTAEDHDILPDGYIVNKGETVYYLSYAMGRMPYIWGDDAEEFKPERWLKDGIFQPESSFKFIAFHAGPRICLGKEFAYRQMKIVSIALIRFFRFKLANETNDVRYRTMFTLHIDKGLPLYALPRCHVS 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01250 950 SUPERFAMILY Cytochrome P450 518 946 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 SUPERFAMILY Cytochrome P450 38 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Tsu08g01250 950 Pfam Cytochrome P450 47 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 Pfam Cytochrome P450 508 925 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 886 895 IPR017972 GO:0005506|GO:0016705
Tsu08g01250 950 Gene3D Cytochrome P450 33 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 Gene3D Cytochrome P450 508 944 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 PANTHER CYTOCHROME P450 5 510 - -
Tsu08g01250 950 PANTHER CYTOCHROME P450 509 948 - -
Tsu08g01250 950 PRINTS E-class P450 group I signature 751 777 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 PRINTS E-class P450 group I signature 731 748 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 PRINTS E-class P450 group I signature 883 893 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 PRINTS E-class P450 group I signature 893 916 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 PRINTS E-class P450 group I signature 805 823 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01250 950 PANTHER CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 1 5 510 - -
Tsu08g01250 950 PANTHER CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 1 509 948 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01250 Tsu-Chr8 13990479 13999474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01250 509 946 Cytochrome P450 AT2G45510 65.753 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01250 - - aprc:113851122 878.241