Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01246 ATGCCATTACTATCCATGGATATTTTATCAAATCCTTATCTTTTTACAGCTTTGTCTGCatctttaattcttttattGGTTCAATTTCTATTGAGAAAATTGAACAAAAGCAATAATAGCATGAAGAAGAAGTATCATCCTGTTGCTGGAACTGTGTTTAATCAGTTGATGAATTTCAATAGACTTCATCATTATATGACTGATCTTGCAAGAAAGTACAAGACATACAGGTTGCTTAacttcttcagaaatgaagTTTATACTGCAGATCCAAGTAATGTTGAATATATACTCAAAACCAATTTTGGCAATTATGGAAAGGGTTTGTACAATTACCACAATTTGAATGATTTACTAGGAGATGGAATTTTCACTGTTGATGGCGAGAAATGGCTTGAACAAAGGAAGATATCAAGTCATGTATTCTCCACCAACATGTTAAGGGACTTCAGTACTTCAATATTCAGAACAAATGCAGCAAAAGTTGCAAATATAGTGTCTATAGCTGCAAATTCTAATACTAAGATAGAAATCCAAGATCTTTTCATGAAATCAACACTGGATTCAATTTTCAAAGTTGCATTTGGAACTGAACTTGACAGCATGGGTGGAACAAGTGAAGAAGGGAAGAATTTTGCCATTGCTTTCGATTCTGCAAACGCTTTAACGCTTTATCGTTATGTTGATGTCTTCTGGAAGATAAAGAAGTTTCTCAATCTTGGATCAGAGGCCACTTTAAGAAAGAATACTCAAATTGTAAATGAATTTCTCATTAAGCTAATAACCactaaaattgaagaaatgaggAATTCAAAGGGTGATTCAGTTAGAAAAAGTGGAGATATTCTCTCAAGGTTTCTGCAAGTGAAGGATTTTGATACAACATACTTAAGGGATATAATTCTAAACTATCTTATCGCCGGGAAAGATACGACGGCTGCAACACTTTCTTGGTTCATGTATATGCTATGCAAGTACCCTGCAGTACAAGAAAAAGCTGCAGAAGAAGTGAGAGAAgcaacaaacacaaaaacaattaGTAGCTGCACTGAGTTTGTGTCAAGTGTAACAGATGAAGCTATTGAAAAGATGAATTATCTCAATGCAACACTCACAGAAACTCTCAGACTTTATCCTGCAGTTCCTGTGGATGCAAAGATTTGCTTTTCTGATGATACATTACCAGATGGATATAGTGTAAAAAAAGGAGACATGGTGGCTTACCAACCTTATGCAATGGGGAGGATGAAATTCATATGGGGTGATGATGCTGAAGAATTTAAACCAGAAAGATGGCTTGATGAGAATGGCATTTTTCAGCCAAAGAACCCTTTCAAGTTTACTGCTTTTCAGGCAGGTCCTCGGATATGTCTAGGAAAGGAGTTTGCTTATAGACAGATGAGGATATTCTCAGCTGTTTTATTAGGTTGTTTTCGTTTCAAATTGaatgatgaaaagaaaaatgtgacGTATAAGACAATGATAACTCTTCACATTGATGGAGGTCTTGATATCAAAGCATTGCACAGGGATTAG 1536 0.3353 MPLLSMDILSNPYLFTALSASLILLLVQFLLRKLNKSNNSMKKKYHPVAGTVFNQLMNFNRLHHYMTDLARKYKTYRLLNFFRNEVYTADPSNVEYILKTNFGNYGKGLYNYHNLNDLLGDGIFTVDGEKWLEQRKISSHVFSTNMLRDFSTSIFRTNAAKVANIVSIAANSNTKIEIQDLFMKSTLDSIFKVAFGTELDSMGGTSEEGKNFAIAFDSANALTLYRYVDVFWKIKKFLNLGSEATLRKNTQIVNEFLIKLITTKIEEMRNSKGDSVRKSGDILSRFLQVKDFDTTYLRDIILNYLIAGKDTTAATLSWFMYMLCKYPAVQEKAAEEVREATNTKTISSCTEFVSSVTDEAIEKMNYLNATLTETLRLYPAVPVDAKICFSDDTLPDGYSVKKGDMVAYQPYAMGRMKFIWGDDAEEFKPERWLDENGIFQPKNPFKFTAFQAGPRICLGKEFAYRQMRIFSAVLLGCFRFKLNDEKKNVTYKTMITLHIDGGLDIKALHRD 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01246 511 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01246 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01246 511 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01246 511 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01246 511 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01246 511 Gene3D Cytochrome P450 30 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01246 511 PANTHER CYTOCHROME P450 21 510 - -
Tsu08g01246 511 SUPERFAMILY Cytochrome P450 44 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01246 511 Pfam Cytochrome P450 46 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01246 511 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01246 511 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01246 511 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01246 511 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01246 511 PANTHER CYTOCHROME P450-RELATED 21 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01246 Tsu-Chr8 13916409 13920507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01246 6 510 Cytochrome P450 AT2G45510 51.468 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01246 - - gmx:100789049 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01246 08 13916409 13920507 Tsu08g01246 08 13916409 13920507 ECH