Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01245 ATGGATGCTTTGTACACTCTGTTGACTTTCATAGCCTTCTCTTTTCTAGCAATTTTCCTAGCTATATGTTTCATCATGATGCCAATCTTCATAGGAAAATCCATAGGAAACCCAAAATATGCACCTGTTAAAGGCACAGTGTTCAACCAACTTTTCTACTTCAACAAACTCCATGATTACCATACTCAAATGGCCAAAACTCATTCAACTTTTAGGTTTCTTGCTCCAAATCATAGTGAGTTATATACCATAGATGTTAGAAATATTGAACATGTATTGAAaactaattttgataaatactcTAAAGGTAAGTATAATCAAGATATCATAACTGATCTTTTTGGTGAGGGGATTTTTGCTGTTGATGGTGATAAGTGGAAGCAGCAAAGGAAAGTTGCTAGCTATGAATTTTCTACAAGAGTTCTTAGAGATTTTAGTTGTTCTGTTTTTAGAAAGAATGCTGCCAAATTGGTCAAAGTTATATCACAATTTTCTCATGAGGGTCTGAATTTTGATATGCAAGACTTACAAATGAGATGTGCTTTGGACTCAATATTCAAAGTTGGGTTTGGAACAGAATTGAATTGCTTAGAAGGATCAAGTAAAGAGGGAACTGAATTCATGAAGGCATTTGATGAATCAAATGCTTTACTTTATTGGCGCTATGCTGATCCAATTTGGAGCATTAAGAGATTTCTTAACATTGGTGGTGAGGCTAAGCTTAAGCGCAATGTCAAATTGATAGATAAATTTGTGAATGGAGTCATAAACACAAAAAAGGAACAGTTGGCACTTCACCAATATTATAATGTTAAAGAAGACATACTATCAAGGTTTTTAATGGAGAGTAAGAAGGGCCAAACAACTATAAGTGATAAGTATTTGAGGGATATAATTCTTAACTTTATGATAGCTGGCAAAGACACCACTGCAAACACTCTTTCATGGTTCTTCTACATGCTATGCAAGAACCCTCTTGTAGAGGACAAGATTGTGCAAGAAATAAAAGATGTCACTTGTAGCCATGAAAGTGAACTCAACAACATAGATGAGTTTGTTGCCAATTTAACAGATGTCATCCTTGATAAGATGCATTATCTTCATGCAGCTTTGACAGAGACATTGAGATTGTACCCTGTAGTTCCTGTGGATGGAAGAAATGCAGAAGCACATGATGTTCTTCCTGATGGCCATAAACTAGAAAAGGGTGATGGAGTATACTATTTGGCCTACGCTATGGGTCGAATGTCATCCATTTGGGGGGAAGATACTGAGGAATTTCGTCCTGAAAGATGGATTAACAACGGAATTTTCCAACCCGAATCACCATTCAAATTTGTAGCATTCCATGCTGGACCTCGTATGTGCTTAGGGAAGGACTTTGCATATAGACAAATGAAAATAGTAGCAATGGCTAAtcttcatttcttcaaatttaaattGGCAAATGGAATAGAAAATGTGACTTATAAGGTCATGTTTACCCTTCACTTGGACAAGGGCCTCCCTCTCAATGCAATTCCAAGGTCATACTAA 1536 0.3561 MDALYTLLTFIAFSFLAIFLAICFIMMPIFIGKSIGNPKYAPVKGTVFNQLFYFNKLHDYHTQMAKTHSTFRFLAPNHSELYTIDVRNIEHVLKTNFDKYSKGKYNQDIITDLFGEGIFAVDGDKWKQQRKVASYEFSTRVLRDFSCSVFRKNAAKLVKVISQFSHEGLNFDMQDLQMRCALDSIFKVGFGTELNCLEGSSKEGTEFMKAFDESNALLYWRYADPIWSIKRFLNIGGEAKLKRNVKLIDKFVNGVINTKKEQLALHQYYNVKEDILSRFLMESKKGQTTISDKYLRDIILNFMIAGKDTTANTLSWFFYMLCKNPLVEDKIVQEIKDVTCSHESELNNIDEFVANLTDVILDKMHYLHAALTETLRLYPVVPVDGRNAEAHDVLPDGHKLEKGDGVYYLAYAMGRMSSIWGEDTEEFRPERWINNGIFQPESPFKFVAFHAGPRMCLGKDFAYRQMKIVAMANLHFFKFKLANGIENVTYKVMFTLHLDKGLPLNAIPRSY 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01245 511 PANTHER CYTOCHROME P450 5 510 - -
Tsu08g01245 511 Pfam Cytochrome P450 47 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01245 511 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01245 511 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01245 511 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01245 511 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01245 511 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01245 511 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01245 511 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01245 511 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01245 511 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01245 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Tsu08g01245 511 Gene3D Cytochrome P450 33 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01245 511 PANTHER CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 1 5 510 - -
Tsu08g01245 511 SUPERFAMILY Cytochrome P450 37 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01245 Tsu-Chr8 13909665 13913887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01245 7 510 Cytochrome P450 AT2G45510 62.205 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01245 - - aprc:113851122 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01245 08 13909665 13913887 Tsu08g01245 08 13909665 13913887 ECH