Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01244 atggatgttTTGTACACAATGTTGAATTTCGTAGTCTTATCTTTTCTAACTCTTTTCCTAGCCTCGAGTTTCATCATGATGacaattttcaaaggaaaatcCATAGGAAACCCAAAATATGCACCTGTTAAAGGCACAATGTTTAACCTACTTTTCAACTTCAAGAAACTCCATGATTACCAAACTCAAAGCGCCAAAACTCATCCAACTTGTAGGCTTCTTGCTCTAAATTGTAGCAACTTGTACACAATAGATGTGAGAAATATTGAACATATATTGAAAACCAATTTTGATAAATACTCCAAAGGTAAGATTAATCAAGATGTTATGATTGATCTTTTTGGTGAGgggatttttgttgttgatggtgaTAAGTGGAAGCATCAAAGGAAAGTTGCTAGCTATGAATTCTCCACAAGAGTTCTTAGAGATTTTAGTTGCTTTGTGTTTAGAAAGAATGCTGCCAAATTGGTCAAAGTTATATCACAATTTTCTCATGAAGGACTTGTTTTAGATATGCAAGACTTACAAATGAGATGTGCTATGGATTCGATATTCAAAGTTGGGTTTGGAACAGATTTGAATTGCTTAGAAGGTTCAAGTAAAGAGGGAACTGAATTCATGGAGGCATTTGATGAATCAAATGCTTTAATATATTGGCGTTTTGTTGATCCAACTTGGAGCATTAAGAGATTTCTTAACATTGGGGGTGAGGCTAAGCTTAAGCGCAATATCAAATTGATGGATGAATTTGTCAATGGAGTAATAAAGACCAAAAAGGAACGGTTGAAACTTCAACAACAAGATTCTAATGTTAAAGAAGACATACTATCAAGGTTTTTGATGGAGAGCAAGAAAGACCAATTAAGTGATAAGTATTTGAGAGACATAATTCTTAACTTTATGATAGCTGGCAAAGATACCACTGCAAACACTCTTTCATGGTTCTTCTACATGCTATGCAAGAACCCTCTTGTAGAGGACAAGATTGTGCAAGAAATAAAAGATGTCACTTGTAGCCATGAAAGTGAACTCAACAACCTAGATGAGTTTGTTGCCAATTTAACAGATGTTATTCTTGATAAGATGCATTATCTTCATGCAACATTGACAGAGACATTGAGATTGTACCCTGTAGTCCCTGTGAATGGGAGAATTGCAGATGCACCTGATGTTCTTCCCGATGGTCACAAAATAGAAAAGGGGGATGGAGTATACTACTTGTCCTACGCTATGGGTCGAATGTCATCAATTTGGGGAGAAGATGCTGAGGAATTTCGTCCAGAAAGATGGATTAACAGTGGAATTTTTCAACCTGAACCGCCATTCAAATTTATAGCATTCCATGTAACTTTTACCTTTCTTTTCCTttga 1374 0.3443 MDVLYTMLNFVVLSFLTLFLASSFIMMTIFKGKSIGNPKYAPVKGTMFNLLFNFKKLHDYQTQSAKTHPTCRLLALNCSNLYTIDVRNIEHILKTNFDKYSKGKINQDVMIDLFGEGIFVVDGDKWKHQRKVASYEFSTRVLRDFSCFVFRKNAAKLVKVISQFSHEGLVLDMQDLQMRCAMDSIFKVGFGTDLNCLEGSSKEGTEFMEAFDESNALIYWRFVDPTWSIKRFLNIGGEAKLKRNIKLMDEFVNGVIKTKKERLKLQQQDSNVKEDILSRFLMESKKDQLSDKYLRDIILNFMIAGKDTTANTLSWFFYMLCKNPLVEDKIVQEIKDVTCSHESELNNLDEFVANLTDVILDKMHYLHATLTETLRLYPVVPVNGRIADAPDVLPDGHKIEKGDGVYYLSYAMGRMSSIWGEDAEEFRPERWINSGIFQPEPPFKFIAFHVTFTFLFL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01244 457 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01244 457 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01244 457 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01244 457 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01244 457 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01244 457 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01244 457 PANTHER CYTOCHROME P450 6 450 - -
Tsu08g01244 457 Pfam Cytochrome P450 40 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01244 457 Gene3D Cytochrome P450 32 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g01244 457 PANTHER CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 1 6 450 - -
Tsu08g01244 457 SUPERFAMILY Cytochrome P450 37 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01244 Tsu-Chr8 13903275 13908874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01244 1 450 Cytochrome P450 AT2G45510 57.743 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01244 - - aprc:113851122 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01244 08 13903275 13908874 Tsu08g01244 08 13903275 13908874 ECH