Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01242 ATGAAGATTTTCCTTCCACTTGTAGCTTCTTTTGCTCTTCTGTGCTCTTTGTATATGTTCCTATGCTGGTGTAAGGTTTGTAGTTTCATGTCTAGGACAAAAGCTATGAAGAATGGTGACTTTTTTTCAATATGGAACTATGATGGTAAAATTGCATATGAAGACATAATTGAAGCAACAGATGATTTTGATATCAAATATTGCATAGGAACTGGTGGTTATGGTAGTGTCTATAAAGCAAAACTACCTACTGGTAGAGTAGTGGCATTAAAGAAACTCCACAATTTAGAAGCTAATGAACCATTGATTAGAAGGATTTTTAAGAATGAGGTGAGAATGTTGACAAAGATAAGGCATAGAAATATTTTGAAGCTGTATGGTTTTTGTTTGCACAATAGATGCatgtttttggttttggaaTACATGGAAAAGGGAAGTTTGTATTGTGTTCTACACAATGACGTTGAAGCAGTGGAGTTGGATTGGAGTAAGAGAGTAGACATTGTCAAAGGAATTGCACATAGCTTATCATACCTTCATTATGATTGCAAGCCAGCAATCATTCATAGAGATGTGACAACAAAAAATGTTCTGTTGAACTCAGAAATGGAAGCTTGTCTATCTGACTTTGGCATAGCGAGACTTCGGAATTCTAGTTCGTCAAATGAAACAATACTTGCGGGCACTTATGGATATCTTGCACCAGAACTTGCTTATACTGATAGTGTGACTGAGAAATGTGATGTGTACAGCTTTGGAGTGGCTGCTCTTGAAATTATAATGGGAAAGCATCCAGGAGAACTTGTTTCATCATTAAGATTTGCAACCACTAGAAACATTCTCCTTAAAGATTTATTAGACAAGAGAATAATAGCAACCATAAATCAGCAATCTTCTCAAAGTTTAGCTCTTATAGCAACACTAGCGTTTGCATGTCTTCATTCTCAACCAAGGGGTAGACCAACAATGCAAACAGTGTGTGACAAACTTGTCAAAGGAAATCTCTCATTAACCGAACCATATGAAGAAATTTCTATAAGGGATATGTTAAATCAGGAATTATAA 1065 0.3521 MKIFLPLVASFALLCSLYMFLCWCKVCSFMSRTKAMKNGDFFSIWNYDGKIAYEDIIEATDDFDIKYCIGTGGYGSVYKAKLPTGRVVALKKLHNLEANEPLIRRIFKNEVRMLTKIRHRNILKLYGFCLHNRCMFLVLEYMEKGSLYCVLHNDVEAVELDWSKRVDIVKGIAHSLSYLHYDCKPAIIHRDVTTKNVLLNSEMEACLSDFGIARLRNSSSSNETILAGTYGYLAPELAYTDSVTEKCDVYSFGVAALEIIMGKHPGELVSSLRFATTRNILLKDLLDKRIIATINQQSSQSLALIATLAFACLHSQPRGRPTMQTVCDKLVKGNLSLTEPYEEISIRDMLNQEL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01242 354 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 3 347 - -
Tsu08g01242 354 SUPERFAMILY Protein kinase-like (PK-like) 42 330 IPR011009 -
Tsu08g01242 354 Gene3D Transferase(Phosphotransferase) domain 1 142 343 - -
Tsu08g01242 354 Pfam Protein kinase domain 67 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01242 354 ProSitePatterns Tyrosine protein kinases specific active-site signature. 187 199 IPR008266 GO:0004672|GO:0006468
Tsu08g01242 354 ProSitePatterns Protein kinases ATP-binding region signature. 69 91 IPR017441 GO:0005524
Tsu08g01242 354 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 347 - -
Tsu08g01242 354 ProSiteProfiles Protein kinase domain profile. 63 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01242 354 Gene3D Phosphorylase Kinase; domain 1 25 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01242 Tsu-Chr8 13859100 13860465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01242 3 235 Receptor kinase-like Gene Family AT4G08850 49.372 2.26e-73 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu08g01242 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01242 - - gmx:102670020 560.451