Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01236 ATGCCATCCCGTCCGCCGCCACAACAACCACCTCTTCCAACCGCCCACCGCCATCACCACCACCGTGAAATGATCCTCGGCAGCTGTATCGCAGCTGCTGTCTTCCTAACAGCAGCAATAATCTCCCTCGTAATCTTCCTCTACCGTAAACTATCACATAACCGAACAACACCGTTCGAACAAAGCCAAAGAAGATTCTCTTACTCCGTTCTCCGTCGTGCTTCAAATTCATTCTCACCTTCAACTCGTCTCGGTCACGGTGGTTTCGGTTCAGTTCACAAAGCTACTCTTCCGTCTGGTGAAACCGTTGCTTTGAAAGTAATGGATTCACCTGGTTCGATTCAAGGAGAAAGAGAGTTTCATAACGAACTTTCTCTTTGTTCAAATCTGAATTCACCTTTCATTCTTTCACTTCTTGGTTATTCTTCTGACCGGTCTGGGAAAAAGCTTGTTTTGGTTTATGAACTTATGGTGAACCGGAGTCTTCAAGATGCGTTATTGGACCGGAGATGTGTTGAATTGATGTGTTGGTCGAACCGGTTTGATGTTGTTGTTTCGGTTGCTAAAGGACTTGAAtatcttcatcatcaatgtCATCCTCCTGTGATTCATGGTGATATTAAACCGAGTAATGTTCTTTTGGATCGTGAATTTAGAGCTAAAATTGGGGATTTTGGTCTTGCTAGGGTTAAGTGTTTGGAAGATTCTGGAATGGAGATGATGGTGGAAGAGATTCatgtgaagaaaaaaagagaggatcttgttggtggtggtggtggtgttgttgGTGTTAGTGTTGAGGATTGTAGTTCTGTTTCTGTTGTTGAGGAATTTGAGAGTGTTGTTACTAATACTACGGTTGGATTTGATGTTGATCGGTCGCCGGAGAGTTGTAATGTGAGGATTTTGGATTCCGATGCATCACCGGAGGTTTCACCGGAGGTGGGGATTGTGTCGCCGGAGACAAGTGGGGTTGAGAAATTAAGTGTTGTGTCTGATGGTTGTTTTGATAAGTTTAGTATTGATAGTGGGAATCCGAAGAAGagaggaggtggtggtggtggttctgGGAGGGATTGGTGGTGGAAGCAAGAGAATAATGGGGGAGGATCTGAATCAGGGAGGGTGAAAGATTATGTTATGGAGTGGATTGGGAGTGAGATAAAGAAGGAGAGACCTAAGAGTAGTGAATGGGTTGGTTCTGGTTCATCGATTTGTTCCGGTGGTGATGCGGCTGCGCCATCGAAGGTGGAGGGTAAGAAGAAACAGAGGAAGAAATTGGAATGGTGGGCTGCACTTGATGAGGAGAAGGTTAAAGGGAAGAAGAATAGGAAACCAAGGGAATGGTGGAAGGAGGAGTTTTGTGAGGAGCTTTCAAAGAAGAGtaggaagaaaaagagaagtcTTGATTGTCGCGGCGGAGGCGGTGGTGGGGAATCGTGGTGGCAGAGAGACGAGGATGTAGGTAACGCGGCggtggagaagaagaaaaagaggaaaagTAAGAGTAGTAGAGGGAGTATTGATTGGTGGTTGGATGGTTTAAGTGGCGAGCTTAGACATAATGGAAGAAGAAATAGTCAAGATTGGGGTAATGGTGATGTACCAAAGAGTGGTGGAATCAGTAGCACACCAAGTATGAGAGGAACAGTTTGTTACATTGCTCCTGAATACGGTGGTGGTGGACAATTATCTGAGAAATGTGATGTGTATAGTTTTGGTGTTCTTCTTTTGGTTTTGGTTGCTGGAAGAAGACCACTTCAAGTAACAGCATCACCAATTTCAGAATTTGAGAGAGCAAATCTAATTTCATGGGCTAGACAACTTGCTCATAATGGGAAACTTTTGGATCTTGTTGATAGTTCTATTCATTCTTTGGATAAAGAACAAGCATTGCTTTGTATCACCATTGCATTGTTGTGTTTGCAGAGATCACCTGGGAAAAGACCTTCCATGAAAGAGATTGTTGGAATGCTTTCTGGTGAGACTGACCCACCTCATTTACCCTTTGAGTTCTCACCTTCACCACCCTCTAATTTCCCTTTCAAATCAAGAAAAAAGGCTAGGTGA 2070 0.4116 MPSRPPPQQPPLPTAHRHHHHREMILGSCIAAAVFLTAAIISLVIFLYRKLSHNRTTPFEQSQRRFSYSVLRRASNSFSPSTRLGHGGFGSVHKATLPSGETVALKVMDSPGSIQGEREFHNELSLCSNLNSPFILSLLGYSSDRSGKKLVLVYELMVNRSLQDALLDRRCVELMCWSNRFDVVVSVAKGLEYLHHQCHPPVIHGDIKPSNVLLDREFRAKIGDFGLARVKCLEDSGMEMMVEEIHVKKKREDLVGGGGGVVGVSVEDCSSVSVVEEFESVVTNTTVGFDVDRSPESCNVRILDSDASPEVSPEVGIVSPETSGVEKLSVVSDGCFDKFSIDSGNPKKRGGGGGGSGRDWWWKQENNGGGSESGRVKDYVMEWIGSEIKKERPKSSEWVGSGSSICSGGDAAAPSKVEGKKKQRKKLEWWAALDEEKVKGKKNRKPREWWKEEFCEELSKKSRKKKRSLDCRGGGGGGESWWQRDEDVGNAAVEKKKKRKSKSSRGSIDWWLDGLSGELRHNGRRNSQDWGNGDVPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGKLLDLVDSSIHSLDKEQALLCITIALLCLQRSPGKRPSMKEIVGMLSGETDPPHLPFEFSPSPPSNFPFKSRKKAR 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01236 689 PANTHER OS07G0586332 PROTEIN 1 689 - -
Tsu08g01236 689 MobiDBLite consensus disorder prediction 392 420 - -
Tsu08g01236 689 MobiDBLite consensus disorder prediction 342 374 - -
Tsu08g01236 689 Gene3D Phosphorylase Kinase; domain 1 43 156 - -
Tsu08g01236 689 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Tsu08g01236 689 MobiDBLite consensus disorder prediction 528 543 - -
Tsu08g01236 689 PANTHER OS07G0586332 PROTEIN 1 689 IPR044576 -
Tsu08g01236 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Tsu08g01236 689 MobiDBLite consensus disorder prediction 666 689 - -
Tsu08g01236 689 Pfam Protein kinase domain 81 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01236 689 Pfam Protein kinase domain 544 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01236 689 Gene3D Transferase(Phosphotransferase) domain 1 514 665 - -
Tsu08g01236 689 Gene3D Transferase(Phosphotransferase) domain 1 157 254 - -
Tsu08g01236 689 SMART serkin_6 78 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01236 689 MobiDBLite consensus disorder prediction 522 543 - -
Tsu08g01236 689 SUPERFAMILY Protein kinase-like (PK-like) 52 678 IPR011009 -
Tsu08g01236 689 ProSiteProfiles Protein kinase domain profile. 78 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01236 Tsu-Chr8 13777440 13780505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01236 519 659 Receptor kinase-like Gene Family AT3G58690 35.570 9.19e-15 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Tsu08g01236 Pkinase 2.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01236 - - gmx:100814933 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01236 08 13777440 13780505 Tsu08g01236 08 13777440 13780505 ECH