Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01235 ATGGCAGAATCATCACCTTCCAAACAAAACTTAACCTTTGACCCCTACGAATTCCTCAAAATCAAACTCAATCCAAACGGTTCCTTAACAAGAAACTACGTCATCCCCACCGTGCCACCATCCTCCGATCCTAGCAACTCTCCTCCGCAACCCGCTCTCTCTAAAGACATTATCCTAAACGCCTCCGCAAAAACATCAATCCGTCTCTTTATTCCAAACCCTCCACCGTCTTCTTCCGCCGCTAAACTCCCCCTCCTTCTCTACTTCCACGGAGGCGGTTTCATCATGTACCACCCTTCCTCCCTCATCTTTCACCAATCTTGCACCACATTTGCTGCTGAAATCCCCGTCGTTGTTGCCTCTGTTGATTATCGCCTCACGCCTGAGCATCGTCTTCCTGCCGCATACGATGACGCTGTTGAATCTCTTCTCTGGCTCAAATCACAAGCTCAAAATCCAAATGAGTCTGATCCATGGATTAGAGATCATGTGGACTTTAATAAATGTTTCTTAATGGGAAATAGTGCAGGAGGTAACATTGCCTATTTCACGGCTCTTCATGTTCTAGATCTTGATCTTGCTCCTATTAAGATCCAAGGGTTGTTATTAAACTGTCTATTTTTTAGTGGGGTACAAAGGACAGAATCTGAGCTTCGTTTGATTAACGATCATATATTACCGTTACCTGCGGGTGATCTCATGTGGAACTTATCTTTGCCCGAGGGTGCAGATCGCGACCACGTGTATTGTAATCCAACGGTTTCAGATGTAGTATACGGTGAGAAGATCGGACGACTGCCGAGAACTTTTATTAATGGCTACAGTGGGGATCCATTGGTGGATAAACAAAAGGAGGTAGTGAAGATTTTGGAAGCACATGGGGTGCACGTGGAAGCCGATTTTTGTGAGGATGGGTATCATGCTGTGGAAATATTTGATCGTTCTAAGGCACAAGCTTTGATCGATAATGTTAAGAAATTTATACTCTCTACGGTTGATCCTCAATCCTCTATGTAA 1017 0.4444 MAESSPSKQNLTFDPYEFLKIKLNPNGSLTRNYVIPTVPPSSDPSNSPPQPALSKDIILNASAKTSIRLFIPNPPPSSSAAKLPLLLYFHGGGFIMYHPSSLIFHQSCTTFAAEIPVVVASVDYRLTPEHRLPAAYDDAVESLLWLKSQAQNPNESDPWIRDHVDFNKCFLMGNSAGGNIAYFTALHVLDLDLAPIKIQGLLLNCLFFSGVQRTESELRLINDHILPLPAGDLMWNLSLPEGADRDHVYCNPTVSDVVYGEKIGRLPRTFINGYSGDPLVDKQKEVVKILEAHGVHVEADFCEDGYHAVEIFDRSKAQALIDNVKKFILSTVDPQSSM 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01235 338 Gene3D alpha/beta hydrolase 16 335 IPR029058 -
Tsu08g01235 338 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN 9 329 - -
Tsu08g01235 338 PANTHER ARYLACETAMIDE DEACETYLASE 9 329 - -
Tsu08g01235 338 SUPERFAMILY alpha/beta-Hydrolases 39 315 IPR029058 -
Tsu08g01235 338 Pfam alpha/beta hydrolase fold 86 309 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01235 Tsu-Chr8 13759422 13760438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01235 21 315 Carbohydrate Esterase AT5G16080 36.789 2.51e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01235 - - aprc:113850489 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01235 08 13759422 13760438 Tsu08g01235 08 13759422 13760438 ECH