Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01233 atgtcaaaatttgaTCCATACAGTCACTTTGGCCTGACTTTAAACCCCGACGGAAGCCTCCACCATGCCTACCAGACTCCCAAAACCGACCCAAACCCCGAGCCTGTACCGGGGATTTCCACGGTGTCCAAAGACATAACCATTAACGATGAGAAAAAACTATGGGCTCGAATTTTCAGGCCAACAAAACTTCCATCAAATGACAACACGGTAGCGCGTCTACCGATATTGATCTACTTTCATAATGGTGGCTGGATACTATTCGGTCCTTCTGATAATGACATCCATAAAAAATGCTCGAATTTCGCTTCAGACATCCCTAGTATTGTTATCTCTGTAGCCTATCGTAGGGCGCCAGAGAGTAGGCTTCCCGGACAATACCAAGATGCCCGGGAAACTATTTTGTGGGTGAAAAAACAAGTGACGGATTCAAACGGCGAGAAGTGGTTGAGAGACTATGGTGATCCTTCGAGGTGTTATCTATATGGATGTGGTTGTGGTGGAAATATTGTGTTCAATACGGCTATGCAAATTGATGATATGAATTTGGAGCCTCTAAGAATTTGTGGCCTTGTTATGAACCAACCTATGTTTTCTGGAGAGAAAAGAACGGCTTCAGAATTAAGGTTTGCCACGGACCAGACTCTACCTTTACCAGTATTGGACATGATGTGGGGTTTGGCTTTGCCTAAGGAAACAGATCGTGACCATAGATATTGCAATCCAATGGTGCAAGGACCACATTTGGAAAATGTCAAGAAATTAAAGAGATGTCTTATTATTGGTTATGGTGGAGACATCATGGTTGATCGACAACAAGAATTTGTGACCATGTTGGTCAAATGTGGGGTCCAAGTTGAAGCTCGTTTTGATCCTGTGGGGTTCCATAATATTGATATGGTGGACCCTGCTAGAGCTAGTGCAGTTATAAATATTGTAAGGGAGTTTATACTTTGA 957 0.4263 MSKFDPYSHFGLTLNPDGSLHHAYQTPKTDPNPEPVPGISTVSKDITINDEKKLWARIFRPTKLPSNDNTVARLPILIYFHNGGWILFGPSDNDIHKKCSNFASDIPSIVISVAYRRAPESRLPGQYQDARETILWVKKQVTDSNGEKWLRDYGDPSRCYLYGCGCGGNIVFNTAMQIDDMNLEPLRICGLVMNQPMFSGEKRTASELRFATDQTLPLPVLDMMWGLALPKETDRDHRYCNPMVQGPHLENVKKLKRCLIIGYGGDIMVDRQQEFVTMLVKCGVQVEARFDPVGFHNIDMVDPARASAVINIVREFIL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01233 318 Pfam alpha/beta hydrolase fold 77 297 IPR013094 GO:0016787
Tsu08g01233 318 SUPERFAMILY alpha/beta-Hydrolases 31 304 IPR029058 -
Tsu08g01233 318 Gene3D alpha/beta hydrolase 8 318 IPR029058 -
Tsu08g01233 318 PANTHER ARYLACETAMIDE DEACETYLASE 1 317 - -
Tsu08g01233 318 PANTHER CARBOXYLESTERASE 9-RELATED 1 317 - -
Tsu08g01233 318 MobiDBLite consensus disorder prediction 21 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01233 Tsu-Chr8 13734809 13736551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01233 17 275 Carbohydrate Esterase AT1G68620 31.034 5.36e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01233 - - gmx:100813863 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01233 08 13734809 13736551 Tsu08g01233 08 13734809 13736551 ECH