Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01216 ATGTTAATGTATTATAACAATTCAAGCATGTTAATGCTAAATATGTTATTACAAAAACTTACCAACTCCTATTCTCTTCTCTGGCTTCCATTACTGCTGATTATACTAAGCAATGTTTCAGTAAATGGTAACTTTTACATTGTTTTCTTAGGAGCTCATCCTGTTAGTAGAGAAGGAGCAGTAGAGAATCATTTAAATATTCTCTCAGCTGTTAAACAAAgCCATCTTGAAGCCAAAGAATCCATAGTATACAGCTATACAAAGAGCTTTAATGCATTTGCTGCTAAACTGTCTGAAGACGAAGCCAACAAGTTATCTGGCATGAATGAAGTGCTCTCAGTATTTCCGAATCAGTACCGCAAGCTACACACAACAAGATCTTGGGACTTCATTGGATTACCTTTGACAGCTAAGAGAAAACTTAAATCAGAGGGTGACACAATTGTGGCTCTTTTGGATACAGGTATAACTCCGGAGTTTCATAGCTTCAAGGATGATGGATTTGGTCCTCCACCTGCTAAATGGAAAGGAACTTGTGACAAATATGTTAATTTCTCAGGCTGCAATAACAAGATCATTGGAGCCAAATACTTCAAGCTTGATGGAAGGCCTGATCCATCTGATATATTATCTCCCATAGATGTTGAAGGCCATGGAACTCATACTGCATCAACAGCAGCAGGAAATCTTGTCCCGAACGCAAGTCTCTTCGGATTAGCCAATGGCACGGCTCGTGGGGCGGTGCCTTCAGCTAGGTTGGCAATTTACAAAGTCTGCTGGACAGAAGATGGATGTGCTGATATGGACATACTTGCTGCATTTGAGGCTGCTATACATGACGGGGTAGATGTCATATCGGTTTCGTTAGGTGGAGGAAATGCAAATTATGCACAGGACTCTATAGCAATTGGTGCATTTCATGCCATGAGGAAAGGCATAATTACAGTCGCCTCTGCTGGAAATGGTGGTCCAACTTTGGCAACTGTCGTAAATAATGCGCCGTGGATAGTCACAGTAGCTGCTAATGGCATTGATAGGGACTTCCAGAGCATTATAGAGTTAGGGAATAGAAAAATTGTTTCTGGAGAAGGAGTAAGCACTTTCagtccaaaacaaaaacaatatccCCTTGTTAATGGGATGGATGCAGCGCGAAACTCTTCAAGAAAGGAAGACGCTAAGTTCTGCGATGGCGACTCCTTAGAGCCAAAAAAGGTAAAAGGAAAGATTGTTTACTGTAGATTTAGAACATGGGGCACTGATGCTGTTGTGAAAGCAATCGGAGGCATAGGTACTATAGTTGAAAATGATCAATTTCTTGATGTTGCTCAAATATTCAGTGCTCCTGCTACCTATGTGAATGAAAGCACAGGTCAAGTTATTACCAATTATATAAAATCTACAAGatCACCATTAGCAGTGATACATAAGAGCCATGAAGTGAAAATACCAGCTCCATTTGTTGCTTCTTTTTCATCTAGGGGTCCAAATCCAGGATCTCAGCATGTTCTCAAGCCTGATGTAACAGCTCCTGGCATTAACATCTTGGCATCATATACACTTAGAACATCAATTACTGGTTTAGAAGGGGACACTCAATTTTCAGAATTTACACTAATGACGGGTACTTCCATGTCTTGTCCTCATGTTTCCGGAGTAGCAGCGTATGTGAAATCATTTCACCCAGATTGGACTCCTGCTGCAATCAGATCAGCTATAATTACCACAGCTAAACCTATGAGCCAAAAAGTTAACAAGGAGGCAGAGTTTGCTTTTGGTGCCGGTCAAGTTAACCCAACAAGAGCTGTGAATCCTGGTTTAGTCTACGACATGGATGACTTCGCTTATATCCAGTTCTTATGCCATGAGGGATATAATGGTTCCACTTTATCAGTACTAATTGGTTCTCCAATAAATTGCACTTCTTTGCTTCCTGGGATTGGCCATGACGCTATTAACTATCCTAGCATTCAATTAAGCGTGAAAAGCAACAAAGACAAAACAATAGGAGTTTTCAGGAGAAGAGTTACCAATGTCGGTCCTGGACCAACCATCTACAATGCCACCATAAAATCTCCAAAAGGAGTTGAAATCATAGTGAAGCCTACTAGCCTCATTTTCTCGCACACCCTGCAAAAGAGGAGCTTCAAGGTAGTAGTGAAAGCAAAATCTATGGCAAGCATGCAAATTGTATCAGGTTCACTGATTTGGAGAAGCGCTCGTTATATTGTTAGAAGCCCTATTGTTATCTACAGTCCATGA 2262 0.4041 MLMYYNNSSMLMLNMLLQKLTNSYSLLWLPLLLIILSNVSVNGNFYIVFLGAHPVSREGAVENHLNILSAVKQSHLEAKESIVYSYTKSFNAFAAKLSEDEANKLSGMNEVLSVFPNQYRKLHTTRSWDFIGLPLTAKRKLKSEGDTIVALLDTGITPEFHSFKDDGFGPPPAKWKGTCDKYVNFSGCNNKIIGAKYFKLDGRPDPSDILSPIDVEGHGTHTASTAAGNLVPNASLFGLANGTARGAVPSARLAIYKVCWTEDGCADMDILAAFEAAIHDGVDVISVSLGGGNANYAQDSIAIGAFHAMRKGIITVASAGNGGPTLATVVNNAPWIVTVAANGIDRDFQSIIELGNRKIVSGEGVSTFSPKQKQYPLVNGMDAARNSSRKEDAKFCDGDSLEPKKVKGKIVYCRFRTWGTDAVVKAIGGIGTIVENDQFLDVAQIFSAPATYVNESTGQVITNYIKSTRSPLAVIHKSHEVKIPAPFVASFSSRGPNPGSQHVLKPDVTAPGINILASYTLRTSITGLEGDTQFSEFTLMTGTSMSCPHVSGVAAYVKSFHPDWTPAAIRSAIITTAKPMSQKVNKEAEFAFGAGQVNPTRAVNPGLVYDMDDFAYIQFLCHEGYNGSTLSVLIGSPINCTSLLPGIGHDAINYPSIQLSVKSNKDKTIGVFRRRVTNVGPGPTIYNATIKSPKGVEIIVKPTSLIFSHTLQKRSFKVVVKAKSMASMQIVSGSLIWRSARYIVRSPIVIYSP 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01216 753 Gene3D - 620 752 - -
Tsu08g01216 753 Gene3D - 345 481 - -
Tsu08g01216 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 45 751 IPR045051 -
Tsu08g01216 753 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 45 751 - -
Tsu08g01216 753 SUPERFAMILY Subtilisin-like 122 607 IPR036852 GO:0004252|GO:0006508
Tsu08g01216 753 Gene3D Peptidase S8/S53 domain 146 613 IPR036852 GO:0004252|GO:0006508
Tsu08g01216 753 CDD PA_subtilisin_like 352 475 - -
Tsu08g01216 753 ProSiteProfiles Serine proteases, subtilase domain profile. 127 603 - -
Tsu08g01216 753 Pfam Subtilase family 146 595 IPR000209 GO:0006508|GO:0008236
Tsu08g01216 753 Pfam Peptidase inhibitor I9 46 123 IPR010259 -
Tsu08g01216 753 CDD Peptidases_S8_3 121 577 IPR034197 -
Tsu08g01216 753 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Tsu08g01216 753 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Tsu08g01216 753 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Tsu08g01216 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 37 123 IPR037045 -
Tsu08g01216 753 Pfam Fibronectin type-III domain 652 750 IPR041469 -
Tsu08g01216 753 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01216 Tsu-Chr8 13441633 13446520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01216 44 591 Subtilisin-like Serine Gene Family AT4G00230 64.964 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01216 - - ccaj:109800351 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01216 08 13441633 13446520 Tsu08g01216 08 13441633 13446520 ECH
Tsu08g01216 08 13441633 13446520 Tsu04g01693 04 17964036 17969569 PCT