Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01205 ATGTCCGAAGAAGCTTCTAGAAACATTGATCTCACTCTCGGTGATCCCAAAGAAGAACCGGAAATAGATGATGGGTCAGCTATAAAAGTGATGCCTATGGCGATGCACGTTCCCATGCAAATGAACCAGGCCCAAGCTCAAGCCCAACAACAACCGCTTCAAAAGAGAGCCTCTACAAAAGATCGTCACACCAAAGTAgaaggaagaggaagaagaatcCGAATGCCCGCCACGTGTGCGGCTCGGATATTCCAATTAACCCGAGAACTCGGTCATAAATCCGACGGTGAAACAATCCGGTGGCTACTCGAACACGCTGAACCCGCCATCATTGCCGCCACCGGAACCGGTACTGTCCCCGCCATCGCCATGTCTGTTAACGGCACACTCAAAATCCCAACAACCTCCCCAAATAAGGATCAAGAATCACAACAATCCGAAGACTCACCGGAGAAAAAGAAACGTAAAAGACCATCGAACAGTGCTTACGTGGACATAAACGACAGCGTTTCAGTTTCAGCAGGTTTAATAACTACCtcaaacataaacataaaccaGAATCTAACTGCCACCACGATAATTCCGCAACAAACTACAATTCCGTTACCGCAAAATATGGTTCCTGTGTGGGCCATACCATCAAACGCAGTCGTTTCAGGTGGAAATGCGTTTTTCATGGTTCCAACAAATCAGCCTCAGTTTTTTACATTAGCTAGACCAATTACCGGTTTCGTTTCTTCAATGGTAACACCGGTTattcaacttcaacaacaagCTTCCACGTCATCGAACACGTGTACTACATCTCCGGTAATGAAGTCTCCGGCGAGAGCTACCGTGATGGCGCCGAGTACTGCCGCAACAACCACCACGCAGATGTTGAGGGATTTTTCGTTGGAGATTTATGATAGGCAAGAGCTTCAGTTATTGAGAGAACGAAATTGA 945 0.4434 MSEEASRNIDLTLGDPKEEPEIDDGSAIKVMPMAMHVPMQMNQAQAQAQQQPLQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPNKDQESQQSEDSPEKKKRKRPSNSAYVDINDSVSVSAGLITTSNININQNLTATTIIPQQTTIPLPQNMVPVWAIPSNAVVSGGNAFFMVPTNQPQFFTLARPITGFVSSMVTPVIQLQQQASTSSNTCTTSPVMKSPARATVMAPSTAATTTTQMLRDFSLEIYDRQELQLLRERN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01205 314 MobiDBLite consensus disorder prediction 144 161 - -
Tsu08g01205 314 MobiDBLite consensus disorder prediction 56 71 - -
Tsu08g01205 314 MobiDBLite consensus disorder prediction 130 162 - -
Tsu08g01205 314 PANTHER TRANSCRIPTION FACTOR TCP9 8 311 - -
Tsu08g01205 314 Pfam TCP family transcription factor 58 157 IPR017887 -
Tsu08g01205 314 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 311 IPR005333 GO:0003700
Tsu08g01205 314 ProSiteProfiles TCP domain profile. 59 113 IPR017887 -
Tsu08g01205 314 MobiDBLite consensus disorder prediction 42 71 - -
Tsu08g01205 314 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01205 Tsu-Chr8 13351202 13352387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01205 15 308 TCP Transcription Factor Family AT2G45680 53.374 3.25e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tsu08g01205 TCP 4.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01205 - - cam:101488699 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01205 08 13351202 13352387 Tsu08g01205 08 13351202 13352387 ECH