Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01191 atggaggTAGTGCAACTAAGAAGATTCAATTCAATGGAAAGAAGACCAAGAATGTTGAAAGATTTTCTAAGCGAGAATCTAAGTTCATGTTCATCAAGCGGATTCAAATCATTTCCAAGAAGAACAATTTCAAACAACACCATTCAAATTCATCACACACATTCAtcatcaaaatttcaaacactgataaaaactataaaaaacaACGTATCATtcttcaaaattacaaaatcacCCTCCACCATGCTTTCACTACCACGAACACTATCACGAAAATTATCATCaaagagaagaagaacaagaacaagtCAAAGATGCAAAGGTgaaagagaaattgaaattgaaaacagtACTGTGAAGATTAAAGATATCATACGGTGGAAATCGTTTCGAGATTTACAACAACCTTCTGTTCCGTTACCACCGTTTGATTTTCACCGTTATGTAACGGAATCGTCGACGGTTACGACCACGACAACGACTTGTTCTAGTAGTGACGGTGGTTCTAGTTTGAGTGACGGTGATTTTTTTAGTGAATTGTGGGAAGCGCAAAACGACGGCGTTGAAGAGAGTAAAAAAATTTCGTTTTCATCTCTTTTTGTCGGCAAGGATTCGGTGGCACCGCCGTTCGAAAATCTGACTTGCCAAGATGAACAACACAGTCCAGTTTCAGTTCTTCATGTTGCAGAAAATGAATTTTCAATCTTTGATCAAAGCCTTGCCAATATTGAAAggagaaaacaaaaattcaaacaaactgCTGATAAATTTGAGAGTCATGTAAAATTTGACTTTGCAAGCTTCGATCAATGTCTCTCATTGGATGAGAACTCATATTATGATGAATATAAAGATGACGATAAGAAGGAGGAGAACCAGaaagttgaagagcaagattGGGTTGAGGAAAAGGCAAATCAATTGCTACATAGTGTAGCAACATGTTCATCAGTGGAAAAATGTGATGACAATTTTGGTATAGTTCTCTTGGATTTTTTCAGGGAAGAACTAAGTGGTAATAGAAACCAAAAGAGGAATAGTGAGGAGTTTGAGTTGGAAATAATGAAAATAGCTGAGGATTGGATCAATGAGTCATTTGAAAATGCTTATGACATTGTGCATGTTAATAAAGATGCTTATATCAAGGAAATGGATAGAAGAGGTGGGTGGAATAGGTTTGAAGAGGAGCAAGAAGAATTGGTTTTCGAGATTGAGGCAGCTATATTGCGTGGTTTGGTTGATGAGATTTTGACATAG 1257 0.327 MEVVQLRRFNSMERRPRMLKDFLSENLSSCSSSGFKSFPRRTISNNTIQIHHTHSSSKFQTLIKTIKNNVSFFKITKSPSTMLSLPRTLSRKLSSKRRRTRTSQRCKGEREIEIENSTVKIKDIIRWKSFRDLQQPSVPLPPFDFHRYVTESSTVTTTTTTCSSSDGGSSLSDGDFFSELWEAQNDGVEESKKISFSSLFVGKDSVAPPFENLTCQDEQHSPVSVLHVAENEFSIFDQSLANIERRKQKFKQTADKFESHVKFDFASFDQCLSLDENSYYDEYKDDDKKEENQKVEEQDWVEEKANQLLHSVATCSSVEKCDDNFGIVLLDFFREELSGNRNQKRNSEEFELEIMKIAEDWINESFENAYDIVHVNKDAYIKEMDRRGGWNRFEEEQEELVFEIEAAILRGLVDEILT 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01191 418 Coils Coil 240 260 - -
Tsu08g01191 418 PANTHER OS04G0572500 PROTEIN 1 417 - -
Tsu08g01191 418 PANTHER DUF4378 DOMAIN PROTEIN 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01191 Tsu-Chr8 13166608 13169952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01191 12 418 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 33.713 5.66e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01191 - - mtr:MTR_8g032770 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01191 08 13166608 13169952 Tsu08g01191 08 13166608 13169952 ECH