Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01189 ATGGAGTCTGATGAACCCCAGTCAGCGGAACTCAGGAAGTACACTCGTCTGGTAGCCGGTGTCAAAGTGTTGGTTGTGGATGCTAATTCAACATGCCAAGCAGTTATATCAAAATTGCTTCTTTCACTTGTATATGAGGTACTAGTTACAACTGCTACACTAGCTTACGAGACTTTATCCATTATCGGGGAGAAGAAGAACGAGATCAACCTTGTGCATGTGGAGGCTCAGTTGCCAGACATGGAAATATATGAGCTCatagagaaaatgaaaagttcTAATATTCAATCTTTCGTTATGACGGCTTATGATGAAGACATTCCTCCATATCAAAAGAACCAAGTTCAAGAGCTAAATTGTGATTTAGAAAGCCGGTTCAGATTTCTGATCTACAACAGCTTTCGCAGTGTGGAACCAATTTGA 423 0.3948 MESDEPQSAELRKYTRLVAGVKVLVVDANSTCQAVISKLLLSLVYEVLVTTATLAYETLSIIGEKKNEINLVHVEAQLPDMEIYELIEKMKSSNIQSFVMTAYDEDIPPYQKNQVQELNCDLESRFRFLIYNSFRSVEPI 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01189 140 Gene3D - 13 122 - -
Tsu08g01189 140 ProSiteProfiles Response regulatory domain profile. 22 140 IPR001789 GO:0000160
Tsu08g01189 140 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 106 IPR045279 GO:0009736
Tsu08g01189 140 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR8-RELATED 20 106 - -
Tsu08g01189 140 SUPERFAMILY CheY-like 19 106 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01189 Tsu-Chr8 13128158 13129144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01189 20 121 Response Regulator Gene Family AT2G25180 31.373 1.01e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01189 - K14491 mtr:MTR_8g032710 140.198