Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01130 ATGCTTCCATTTCTAAAACATGTTCTTTTTGGGACCCCTTATCAACAGTATCGTCAAATTGAAGACCCTCTGGCATTTGCTAATGACCCTCTGGCGTGGTCGAGGCCACTGGTTAGATGTTACTCTGGCGTATTCTCCATGGCTGCGGTTCAGGCTAATGTGGTTATGGAAGATAAGTGCCAAGTTGATGTTGGCATTGATGCACTCTTTGTTGGAATTTATGATGGCCATAAAGGCGACACCGTTTCCATCTATCTTAGAGATCATATCTTCAGGGAACTAATGAGGCTTATTCAGGAGAATAATAACAACATGAATGAGAATATTCTGACGCAAGTTGTTGACCGAATGGAGAGAGGTTTTTTGGAGTCTGCTGGAAGAAATGTTTTTGTTAGTTCaggttgtttgatttgtttcataTGGAGAGGGACGTTATATGCCGCCAACGTTGGAGATTCGCGCGCTGTACTCGGTTCTCTGAACGGCATTGGTCAACTTAAAAGATTGGCTGTTAAACAGATAGTTAAAGATCACAATCTTGATCGTCGAGATGTTCAAGTAGCACTCAAGGGCTTGCAGCCAAATATTTATGATATAGATTACCATATTAATTTCCGTACCTGTGCATTTAGATCGGCTTATCATGATGATATAACTGTGATTGTTGTATATTTGGACAAGAGGTCAAGTAGGTAG 696 0.4009 MLPFLKHVLFGTPYQQYRQIEDPLAFANDPLAWSRPLVRCYSGVFSMAAVQANVVMEDKCQVDVGIDALFVGIYDGHKGDTVSIYLRDHIFRELMRLIQENNNNMNENILTQVVDRMERGFLESAGRNVFVSSGCLICFIWRGTLYAANVGDSRAVLGSLNGIGQLKRLAVKQIVKDHNLDRRDVQVALKGLQPNIYDIDYHINFRTCAFRSAYHDDITVIVVYLDKRSSR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01130 231 SUPERFAMILY PP2C-like 37 226 IPR036457 -
Tsu08g01130 231 Pfam Protein phosphatase 2C 67 181 IPR001932 -
Tsu08g01130 231 PANTHER ALPHABET, ISOFORM E-RELATED 21 198 - -
Tsu08g01130 231 SMART PP2C_4 31 223 IPR001932 -
Tsu08g01130 231 Gene3D - 38 208 IPR036457 -
Tsu08g01130 231 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 21 198 - -
Tsu08g01130 231 ProSiteProfiles PPM-type phosphatase domain profile. 41 225 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01130 Tsu-Chr8 12442095 12443165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01130 31 203 PP2C-type Phosphatase Gene Family AT5G06750 42.541 3.67e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01130 K01102 - csv:101222146 140.198