Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01129 ATGATGCTTCATCATGAATTGTCACTTTTTGAGCCTACAATGAATACATATGAAACTAAAATTGTTGACAATGATAAATTCATTATATTTGGATCTGGTGGACTTTGGAAATTGTTGACAAATTGGCAAGCAGCTGAAATTGTTCACACCAATCCACGAGATGGAATCGCGAAAAGGATTTTGATGACTGCTCTAGAGATTGCAGCTAGAACAAACAATATAAGCTATAGCGAGCTTCGGGAGATTCCTATGGGACATGGTGTTATTAGGGGTCCTAGTGTTTATGTTGAAGGAACTAGGCGGGCTTATCATGATGATATCTCTGCGATTGTTGTATTCTTCGACAGAAAGCCGGAACTGAATCCCACTGTGATGCCAGTGGTGACCTCGGTGCCAGGAACCGATTCCTTCAAAGGCTTCTCTGACGAGATTCATCCATCGCCTTTTAATAATCTTGATGCTTTCTCTGAAGCACATCCATACCTTGAGAGGATTGTCTGA 501 0.4112 MMLHHELSLFEPTMNTYETKIVDNDKFIIFGSGGLWKLLTNWQAAEIVHTNPRDGIAKRILMTALEIAARTNNISYSELREIPMGHGVIRGPSVYVEGTRRAYHDDISAIVVFFDRKPELNPTVMPVVTSVPGTDSFKGFSDEIHPSPFNNLDAFSEAHPYLERIV 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01129 166 Pfam Protein phosphatase 2C 15 70 IPR001932 -
Tsu08g01129 166 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 11 138 - -
Tsu08g01129 166 PANTHER ALPHABET, ISOFORM E-RELATED 11 138 - -
Tsu08g01129 166 Gene3D - 10 119 IPR036457 -
Tsu08g01129 166 SUPERFAMILY PP2C-like 12 116 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01129 Tsu-Chr8 12441012 12441763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01129 11 150 PP2C-type Phosphatase Gene Family AT5G06750 37.857 9.52e-24 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01129 K01102 - pvy:116121639 107.071