Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01120 ATGGATAATGACCTCCTTGATTCTAAGAATCTCCTCGAAATCAACTCAAAGGTTGAACTTGCTGGGGTGTTGATGTGTGGAGCTTTTGAGAAAATTATAGACACACACACTGGTATCGATATTGTTCAAAATGTCGTTTATAGTTGCGGGTCCAAATGGATGAGGGTTAATTTTAACCGATTTCATACATTTGTGATCGAAGAAGACGACGTGATCATTGCTACAGCTCTTATTAGATTTAATGGGAGAGAGATTGCAGAAATGTCTTTCATTGCAACAGTTGAGGCACACAAAGGAAAAGGAATCTGTCGTTTATTAATGGCAGAAATTGAATCCTTCCTACGCGGCCTGGAAATTAAAAGCTTGATCATTCCATCCCCTCCGGAGTTTATTGAAATGTGGAAAGGTTGCAACTGTTCTGTTAGGTGCTTTTTCTCCGGCTGTCTTGCAATATGTTCGTCTTCTGCTATGCTTCTTGTCTTGACTGGCTTGTTGCATATAGCAACCATACCAGGTGGTGGTTTTTTGTCAGCACAAACTCTTGATTGTGATGTCTTGGTAATTTCGTGA 570 0.4018 MDNDLLDSKNLLEINSKVELAGVLMCGAFEKIIDTHTGIDIVQNVVYSCGSKWMRVNFNRFHTFVIEEDDVIIATALIRFNGREIAEMSFIATVEAHKGKGICRLLMAEIESFLRGLEIKSLIIPSPPEFIEMWKGCNCSVRCFFSGCLAICSSSAMLLVLTGLLHIATIPGGGFLSAQTLDCDVLVIS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01120 189 PANTHER PHD FINGER PROTEIN 12 7 136 IPR042163 GO:0003714|GO:0045892
Tsu08g01120 189 Gene3D - 34 131 - -
Tsu08g01120 189 Pfam Acetyltransferase (GNAT) family 57 123 IPR000182 GO:0016407
Tsu08g01120 189 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 53 135 IPR016181 -
Tsu08g01120 189 CDD NAT_SF 64 124 - -
Tsu08g01120 189 PANTHER GNAT FAMILY ACETYLTRANSFERASE 7 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01120 Tsu-Chr8 12300840 12303494 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01120 2 134 PHD Transcription Factor Family AT4G14920 43.609 1.16e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tsu08g01120 Acetyltransf_1 8.4e-07 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01120 - - cam:101493361 154.836