Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01087 ATGCTACATTCCAGTAGTAATAACTTGCTTATCCAAGAACAACAACCTATTCGGATCATCGACACAGCCAAATCCGAGATTCAAAAGAGAGAAGCTGAGGCTAGGCAAAAGGAACTAGAACTTCAGAAGGAAAAACCTTTTGCTGCAGAGGAGTTTAATGTAGGTCGATTTTATGAAATTGACCATTCCAACCTTCCACCTAATTCTCCTCTTCAACTAAAATGTGTCAACATTCTCATGGTCAGTGGCACAGGGGAGGGACAAGTATATCTCAGGTATCCAAGCCTCGACTCTCTTTGCAACCACTTCAACGACCAAAGCTTTTGGAACAAAATCCCTGAACTTGATATGGAGTATGTGATGGGAGTCGAATTCGCCATCAAAACACTTTGCAGGACCATCACATACGAGGAATTTGCTCAAAAAAGAAACTCATGGAGCTTTTGGGCCTCTCCTACTAAACAAAACTTTCAAAACTGTAACAGTCCAGTTCCAGTTATCAATGATGCTGCTACTAGTTTGGTTTCCAAGCAGGGTTCATGTTGGTCTGAACTCAAGTTCACGGCGGGTATGTTGCAGTGGGGCCAACGCCGGCAAGTTCGGTACTTGGGTCGTTGTGAGGAGCAAAATAAGGAAAAAGGAGTCATTTTTGCACCTAGGGAAGGGACtaataagaagaaaagaaagaatgttgaagaagaaatggCGGCTGTAAAGGTGGCTCCTTTTGGGGTACCGAGGAGGATGACTCGTCAATGCAAGGAAAACCAAGGTGTGAGTAGTAGCAGTGGGGCTAAAACGTCTATGAAAGCAGTAAACGACACCAAGGAGAAGCAACTCATTGTTTATAGCAAAAAGAATCGAAAAATATCTATTGACAGATGGTCTGCCGAGAGGTATAAGCTGGCAGAGGAAAACATATTGAAGATTATGAAGGAAAAAGAAGCTGTGTATGGAAATCCAATAATGAGGCCAGACTTGAGATTAGAAGCACGAAAGTATATTGGTGACACAGGTTTACTTGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCTGGAGGAGTTGAAAGATTTAGAAGGCGACACAATGCGGAAGGCTTAATGGAGTACTGGTTAGAGAGTGCTGATCTTGTTGATATCAGAAAGGAAATAGGTGTCCAAGACCCTTACTGGACTCCTCCCCCTGGATGGAAGCATGGCGACAGCATTTCACCAGATCATGTTACCAGTAATGAAATCAGAAAGATAAAGGAGGAAATAAATAAGCTGAAACGAGATATGCAGGAGCTtgcatcaaagaaaaaaaaggaaccaTTGATCACTGTGGCTACTCCTACTTCTTGTTTGTCAAGTTTGAATTGTAAGGACTATGGTTCTCAAGTTTCTAAGCAGGAGATTTATGTGGAGCTGGTTCATAAAAAGGCTAAAATTGAAGAACAACTAAAAGAAATTTCTCTGGCTTTGAATGGCATGGAGTTAATGCAGGATCAATTGGGAAGGCTGAAAGAACCAATAATGTCAAAATCATTAACACCACAAACGTTATTGCTATCATCAATGACAGAAAACATTGTGGAGAAGACAAGGGAGAAGGAAAAATGGAATAAtgacaaagaaacaaaatcagCAGACACACAAATGCTGCTAGGAAGTAAAGCAGTAGAGGACAGGGCAGCGAAGATAAGAAGACTGAAAAGTGGTTTCCAAATTTGCAAACCAAGAGGGACCTTTAAGTGGCCAAATATGAGTATGTCTCCACATGTTATGGCCAACCTTGATGAACACACTATTGTCCTAACCCCAGGCTCAGCTTCCTCTTCTACCACCTCACCTCCCAAGCTTATCTTCAAATTTCAGACTCCTAACTTGCCATTATCCCCACCTTGCCCTTCTTCTCTTGTTAAGCCACTGGCAGAGAGGCGCGCTGTAAGCACAACTACTCTCGCACATGTCACTGAACCATTTTCCCCTCCATTAGAGACCCCAAAATTCACAAACACTACTACCATCACCAAAAGCAGTTCTTGTATTAACCTTAATGAGACTCCTCTGGAGGAGTAA 2067 0.4103 MLHSSSNNLLIQEQQPIRIIDTAKSEIQKREAEARQKELELQKEKPFAAEEFNVGRFYEIDHSNLPPNSPLQLKCVNILMVSGTGEGQVYLRYPSLDSLCNHFNDQSFWNKIPELDMEYVMGVEFAIKTLCRTITYEEFAQKRNSWSFWASPTKQNFQNCNSPVPVINDAATSLVSKQGSCWSELKFTAGMLQWGQRRQVRYLGRCEEQNKEKGVIFAPREGTNKKKRKNVEEEMAAVKVAPFGVPRRMTRQCKENQGVSSSSGAKTSMKAVNDTKEKQLIVYSKKNRKISIDRWSAERYKLAEENILKIMKEKEAVYGNPIMRPDLRLEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGLMEYWLESADLVDIRKEIGVQDPYWTPPPGWKHGDSISPDHVTSNEIRKIKEEINKLKRDMQELASKKKKEPLITVATPTSCLSSLNCKDYGSQVSKQEIYVELVHKKAKIEEQLKEISLALNGMELMQDQLGRLKEPIMSKSLTPQTLLLSSMTENIVEKTREKEKWNNDKETKSADTQMLLGSKAVEDRAAKIRRLKSGFQICKPRGTFKWPNMSMSPHVMANLDEHTIVLTPGSASSSTTSPPKLIFKFQTPNLPLSPPCPSSLVKPLAERRAVSTTTLAHVTEPFSPPLETPKFTNTTTITKSSSCINLNETPLEE 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01087 688 PANTHER PROTEIN DYAD 42 675 - -
Tsu08g01087 688 PANTHER PROTEIN DYAD 42 675 IPR044221 GO:0007131|GO:0051177|GO:0051321
Tsu08g01087 688 Coils Coil 519 539 - -
Tsu08g01087 688 Coils Coil 20 44 - -
Tsu08g01087 688 Coils Coil 415 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01087 Tsu-Chr8 11886546 11890428 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01087 284 375 PHD Transcription Factor Family AT5G22260 36.458 4.02e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01087 - - var:108339226 736.102