Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01086 ATGGGTGATGACCAAAAAATTATTACTTTTCCGAAAACATCTCGCTTGATTATGGAGGAGAGTCCTTGTGATTATGATTtcgttgctgctgctgctgaaGATTTGCAGGAAGAGGACGACAACCATGTCGACGAGGGCAAAAGCTTAGGGGCTCCTGAGGAGTTTAGTGTAGGTCGATTTTATGAAATTGACCATTCCAACCTTCCACCTAATTGTCCTGTTCAAGTAAAATGGGTGAACATTGTAATGGTCAGTGGCACAGGGGAGGGACAAGTATATCTGAGGTATCCAAGCCTCGACTCTCTTTGCACGCACTTCAACGACCAAAGCTTTTGGAACAAAATCCCTGAACTTGATCAGGAGTATGTCATGGGAGTCGAATTCGCCATCAAAACACTTTGCAGGAGCATCACATTCGAGGAATTTGCTCAAAAAAGAAACATATGGAGCTTCTGGGCCTCTCCTACTAAAGAAAACTTTCAAAACCGTAACAGTCCAGTTCCAGTTATCAATGATGCTGCTACTAGTTTGGTTTCCAAGCAGGGTTCATGTTGGTCTGAACTCAAGTTCACGCCGGGTATGTTGCAGTGGGGCCAACGCCGGCAAGTTCGGTTCTTGGGTCGTTGTGAGGAGCATAAGGAAAAACGAGTCATTTTTGTACCCAGGGAAGAAGGGacaaataagaagaagaaaagaaagaatgtTGAAGAAGAAATAGAGGCTGTAAAAGTGGCTCCTTTTAGGGTACCGAAGAGGATGACTCGTCAATGCAAGGAAAACCAAGGTGTGAGTAGTAGCATTGGGGCTAAAACGTCTATGAAAGCAGTAAACGACACCAAGGAACAGCAACTCGTTGTTTATAgcagaaagaataaaaaagtatCTATTGACAGATGGTCTGCTGAGAGGTATAAGCTGGCAGAGGAAAACATATTGAAGATTATGAAGGAAAAAGAAGCTGTGTATGGAAATCCAATAATGAGGCCAGACTTGAGATTAGAAGCACGAAAGTATATTGGTGACACAGGTTTACTTGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCTGGAGGAGTTGAAAGATTTAGAAGGCGACACAATGCGGAAGGCTTAATGGAGTACTGGCTAGAGAGTGCTGATCTTGTTGATATCAGAAAGGAAATAGGTGTCCAAGACCCTTACTGGACTCCTCCCCCTGGATGGAAGCCTGGCGACAGCATTTCACCAGATCATGTTACCAGTAACGAAATCAGAAAGATAAAGGAGGATATAAATAAGCTGAAACGAGATATGCTGGAGCTTGcatcaaagaaaaaaacagaagCATTCGTCACTGTGGCTACTCCTACTTCTTGTTTGTCAAGTTTGAATTGTAAGGACTACGATTCTCAGGTTTCTAAGCAGGAGATTTATGTGGAGCTGGTTCATAAAAAGGCTAAAATTGAAGAACAACTAAAAGAAATTTCTCTGGCTTTGAATGGCATGGAGAATCAATTGGGAAAGCTGAAAGAACCAATAATGTCAGAATCATTAACACCACAAACGCTATTGCTATCATCAATGACAGAAAACATTGTGGAGAAGACAAGGGAGAAGGAAAAATGGAATAATGACAAAGAACCAAAATCAGCAGAAACACAAATGCTAGGAAGTAGAGCAGTAGAGGACAGGGCAGCAAAGATAAGAAGACTGAAAAGTGGTTTCCAAATTTGCAAACCAATAGGGACCTTTAAGTGGCCAAATATGAGTATGTCTCCACATGTTGTGGCCAACCTTGATGAACACACTATGGTCCTAACCCCAGGCTCAGATTCCTCTTCTACCACCTCACCTCCCAAGCTTATCTTCAAATCTCAGACTCCTAACTTGCCATTATCCCTATCTTGCCCTTCTTCTCATGTTAAACCACAAGCAGAGAGGCGCGCTGTGAGCACAGCTACTTTGGCACATGTCACTGGACCATTATCCCCTCCATTAGAAACCCCAAAATCCACAAACACTACTACCATCACCAAAAGCAGTTCTTGTATTAACCTTAATGAGACTCCTCTGGACCAGGAGTAA 2070 0.4126 MGDDQKIITFPKTSRLIMEESPCDYDFVAAAAEDLQEEDDNHVDEGKSLGAPEEFSVGRFYEIDHSNLPPNCPVQVKWVNIVMVSGTGEGQVYLRYPSLDSLCTHFNDQSFWNKIPELDQEYVMGVEFAIKTLCRSITFEEFAQKRNIWSFWASPTKENFQNRNSPVPVINDAATSLVSKQGSCWSELKFTPGMLQWGQRRQVRFLGRCEEHKEKRVIFVPREEGTNKKKKRKNVEEEIEAVKVAPFRVPKRMTRQCKENQGVSSSIGAKTSMKAVNDTKEQQLVVYSRKNKKVSIDRWSAERYKLAEENILKIMKEKEAVYGNPIMRPDLRLEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGLMEYWLESADLVDIRKEIGVQDPYWTPPPGWKPGDSISPDHVTSNEIRKIKEDINKLKRDMLELASKKKTEAFVTVATPTSCLSSLNCKDYDSQVSKQEIYVELVHKKAKIEEQLKEISLALNGMENQLGKLKEPIMSESLTPQTLLLSSMTENIVEKTREKEKWNNDKEPKSAETQMLGSRAVEDRAAKIRRLKSGFQICKPIGTFKWPNMSMSPHVVANLDEHTMVLTPGSDSSSTTSPPKLIFKSQTPNLPLSLSCPSSHVKPQAERRAVSTATLAHVTGPLSPPLETPKSTNTTTITKSSSCINLNETPLDQE 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01086 689 Coils Coil 419 439 - -
Tsu08g01086 689 Coils Coil 520 540 - -
Tsu08g01086 689 Coils Coil 480 500 - -
Tsu08g01086 689 MobiDBLite consensus disorder prediction 660 689 - -
Tsu08g01086 689 MobiDBLite consensus disorder prediction 531 553 - -
Tsu08g01086 689 PANTHER PROTEIN DYAD 50 676 - -
Tsu08g01086 689 PANTHER PROTEIN DYAD 50 676 IPR044221 GO:0007131|GO:0051177|GO:0051321
Tsu08g01086 689 MobiDBLite consensus disorder prediction 649 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01086 Tsu-Chr8 11878013 11882095 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01086 290 379 PHD Transcription Factor Family AT5G22260 36.170 6.03e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01086 - - var:108339226 733.406