Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01075 ATGGCAAAGAAGTCACAAAGACGCACTGTGCGGTATGAGAAAGATAAGTCGGGATGTATGTGGGGATTTATTAGTATGTTTGATTTTCGCCATGGTCATTTCACTAGgaagttgattgctgataaGAGTCAAAGCAGCAAGCACTCCGGTGGTGTTGTACATTCTAAGAATAAGTTCGAGGTGTTAAACAATATAGATGAAGATTTTCAAGGCACTTTTGACAGTGTAGAGAATAAAAGACCAACGGTGAGAGCTATTATTAATAAGCCGAGTGTGAAGAAACTCATAGAAGAAGAGATGTTCACTGATCAAAATGCAATGAAGGATATAGAGAATTCTGAAAGGCGTGAAGTCTTCCTGAAGTTAGattccaaaagaaaaaagaaatcgTGTGAGAAAAAACACGATATCGCTGatgatttaaattttgatgCAACATCGAAATCTGAAACTTCACATCGTCAGCACTCAAGGAAGCAATCTAAAGATAATCTTGATGTGGATACAATAATCGAAGAGTTTTGTAATCTAAAAGGTGTTCGTTCCATGATAAATGGCAATGATAGAGAAGTAGAAAAGCATGCACAACTAAACAAGAAACAGAAGAATGCTGTTTCCGGAAAAAATTCAAGAGACGCGATTCGTGAATTTGTGAATCAGATGATATTGAACGGAAAAGATCCGGTGGAAGCTAGAAAGTTTCTTTTCTCTGATGAACTAATGGAAGCACTTCAGCTTATAAGTTCGGATAAGGAATTGTTTCTTGCATTTCTACAAAATCCAAATCCACTTGTATTGAAATGTGTTCAAGAGTTTGAGAGTTCTCAGAGGGAGAAGGACAATGAATGTGATCATGTTATAGGCTGCAAATTCTCGGAACAAGATCACGGCAATAAAGAACAAACTAATGAGATTGTTAACCAGAAGAAGCATAACTTTTTCAGGAAAAAGGTGAAGTCTCAATCAAAAAGTTcaacaaatgaaaatgaaaatggaaataCCGGtgtttcaaataaaattgtcataCTAAAGCCAGGATCAAATACATCggaaaattctaaaaaaacCGTAAACAGCCTTGCGTTGGCTCTAGATTCTCATGATACTGTCAAGGACAGCAGTCCTTCTGAGAGAGGTAGTTCACATTTTTCGCTTACcgagataaaaaagaaattaaaaaatgctATAGGAAGGGAGAGACATGGAAAAGGCATTGGTAAAGACAATGTTGGAATGAGATCTCCTAATAAAGATCATTTCTTCATTGAAAAAATTGCAAGACCTTCAACCGGTGTTACTAAAGGAGACAAGACTGGTAAGAATAAAGATTCGGAAGCGGTTGTGGATCGTGAAAAGGGTATTTATCCAAAACAAGGGGtttctaatttatatattgaaGCTAAAAAACATTTGTGTGAGATGATAAGTAATGAAGATGAGAACATGGACTCGTCGAGTAGGCTAACTTCCAAAACACTCGGAAGAATAATATCTTTTCCTGATTACAACTTTTCTCCACTTAATAGTCCTCGAACCGATTGGGAGGATCGTTTTGTGACCGCAAAGAGGAGACTTCATGGTGAAAGCTATAACAATAAGTCACAAGAAATTAAGTCAGACTCGAATTTCTCAGACGGTATAATTAGCAGTGATAAAGACGAAAATAGGGATGAGATAGTTATTGAAGGTGATGTAGAATCTACAAAAGAGGTAACGATTATAGAATCTTCCTCGGAACCAGTTGGCCTCAGTGCAAGAAATGAGGAACAAAGCCATAATATCTCCGAAAGTTCTGACTGTGCAGGATTTTCTCGAATTTCGGAGCAGGATGTAACAGAAGAAAACCAATCATCATCTCCACTTTCATCGACCTCTCACTCTTCGATCACTAGGGAAACTAAAGAGCAAGAGATTGTCACTGATGTGTCTGCGCGACCAAGTCCAGTGTCTGTTCTCGATGCACCATTCATAGAGGATGATGCCACCTCTGCAAATTCTAGATGTCAACCTGCTGAAGTACCGGTGCGGCCACTACATGTTCAATTTGAAGAGCAAGATTCTTCTCTTTTGAATGAAATCAAGAGAGCAAAATATTGTATTGAAGAAAATGAATCGATATATGTTTACATCGAAGCAGTCCTGCAAGCCTCTGGATTGACAAGGGATCAATTGTTGATGAAATGTCTTTCCTCCGACAAGATACTAGATCCTTCGTTGTTTGATCAGGTAGAATTATCACCAAACCGGCTTTGCCATGACCCGAAACTCCTATATGACTGTATCAATGAAATTCTCATGGAGGTTTGTTGCGATTACTTTGGAGCCTCGCCTTTTGTATCTTTTGTAAATCCTAGCATAAAGCCAACTCCAAATATGAAAACGGTTATTCTCATGGTCTCGGAAGGAGTGTGTTGGCATTTACTTCTCTTGCCCCCGCCACACACGTTGGACAAAATTGTTAGGAAAGACATGGAAAAATGTGGAGCGTGGATGGACCTTCGGTTTGAAGCCGAAACAGTTGGTTTTGAATTAAGCGATGCCATTCTAGAAGAACTGATGGAAGATACTATACTTAGCTGTGTAAGTAAAAGTCTAGAAGGTGAAAGTTACGAGCATAACAACGACAAGGACAAGAACATCACCGATGTGTAA 2652 0.3692 MAKKSQRRTVRYEKDKSGCMWGFISMFDFRHGHFTRKLIADKSQSSKHSGGVVHSKNKFEVLNNIDEDFQGTFDSVENKRPTVRAIINKPSVKKLIEEEMFTDQNAMKDIENSERREVFLKLDSKRKKKSCEKKHDIADDLNFDATSKSETSHRQHSRKQSKDNLDVDTIIEEFCNLKGVRSMINGNDREVEKHAQLNKKQKNAVSGKNSRDAIREFVNQMILNGKDPVEARKFLFSDELMEALQLISSDKELFLAFLQNPNPLVLKCVQEFESSQREKDNECDHVIGCKFSEQDHGNKEQTNEIVNQKKHNFFRKKVKSQSKSSTNENENGNTGVSNKIVILKPGSNTSENSKKTVNSLALALDSHDTVKDSSPSERGSSHFSLTEIKKKLKNAIGRERHGKGIGKDNVGMRSPNKDHFFIEKIARPSTGVTKGDKTGKNKDSEAVVDREKGIYPKQGVSNLYIEAKKHLCEMISNEDENMDSSSRLTSKTLGRIISFPDYNFSPLNSPRTDWEDRFVTAKRRLHGESYNNKSQEIKSDSNFSDGIISSDKDENRDEIVIEGDVESTKEVTIIESSSEPVGLSARNEEQSHNISESSDCAGFSRISEQDVTEENQSSSPLSSTSHSSITRETKEQEIVTDVSARPSPVSVLDAPFIEDDATSANSRCQPAEVPVRPLHVQFEEQDSSLLNEIKRAKYCIEENESIYVYIEAVLQASGLTRDQLLMKCLSSDKILDPSLFDQVELSPNRLCHDPKLLYDCINEILMEVCCDYFGASPFVSFVNPSIKPTPNMKTVILMVSEGVCWHLLLLPPPHTLDKIVRKDMEKCGAWMDLRFEAETVGFELSDAILEELMEDTILSCVSKSLEGESYEHNNDKDKNITDV 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01075 883 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 527 869 - -
Tsu08g01075 883 Pfam Domain of unknown function (DUF4378) 708 855 IPR025486 -
Tsu08g01075 883 PANTHER (, RELATED) 1 525 - -
Tsu08g01075 883 MobiDBLite consensus disorder prediction 309 339 - -
Tsu08g01075 883 MobiDBLite consensus disorder prediction 547 569 - -
Tsu08g01075 883 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 525 - -
Tsu08g01075 883 MobiDBLite consensus disorder prediction 570 629 - -
Tsu08g01075 883 Pfam Protein of unknown function (DUF3741) 219 262 IPR022212 -
Tsu08g01075 883 MobiDBLite consensus disorder prediction 530 644 - -
Tsu08g01075 883 MobiDBLite consensus disorder prediction 324 339 - -
Tsu08g01075 883 PANTHER (, RELATED) 527 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01075 Tsu-Chr8 11781439 11787034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01075 1 845 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.778 4.32e-115 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01075 - - mtr:MTR_8g030750 1355.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01075 08 11781439 11787034 Tsu08g01075 08 11781439 11787034 ECH