Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01043 ATGGCAGGACAAACCATGGCTAAGGTTCTTAAAACATCATTGGAGCTAAGTAACAATGCTTTTGATATAATTAATGGAGTTGCAAACTTTGTGAAAAGCCTTAACTTAAGTTCTTTTACAAGTGAATTGAATAATAGGAAACTTTTGTCTGATGATGATGGTTTCCCAACATGGGCTAGTGAAAATCAAAGGAAACTTCTTGTGTCACCTGAGAGTGTTAAGCCTAATGTTGTTCTTGCTCAAGATGGTAGTGGACAGATTAAGACTTTGACTGAGGCACTTAAACTTGTTCCTATTAAGAACAAAGCTCCTTTTGCTATTCATGTATAA 330 0.3545 MAGQTMAKVLKTSLELSNNAFDIINGVANFVKSLNLSSFTSELNNRKLLSDDDGFPTWASENQRKLLVSPESVKPNVVLAQDGSGQIKTLTEALKLVPIKNKAPFAIHV 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01043 109 PANTHER PECTINESTERASE 3 109 - -
Tsu08g01043 109 PANTHER PECTINESTERASE 3 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01043 Tsu-Chr8 11428618 11428947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01043 4 109 Carbohydrate Esterase AT5G49180 44.444 9.13e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01043 K01051 - gmx:100800194 142.51