Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01038 ATGAAAGTTAAAAGATGGAGAGAAGCTTTAAGAGAAGTTGCTAGTTACTCTGGTTGGGACTCTAAGGACAGGCAAGAGGCATCCTTGGTGGAAACAATGGTTGAACATATtcagaaaaaattgattccaAGATTGAAGGTTAAAGATAACCTTGTTGGAATTGATTTGCGGATGAAGGAAGTATATTCGCTACTAGGAATGAGACTAAATGACGTTCGCTTCATAGGCATATGGGGCATGGGCGGCATAGGAAAGACAACTGTTGCTAGAGAACTGTTTGAAGCGATAAAAGCCGAATTCAAGGTTAGTTGCTTTCTTGCAGACATTAGAGAAACAATTTCTAAGACAAATGGCTTAGTTCACATCCAAAGTGAACTTCTTTCTCATCTCGATATAAGAGGCAATGATTTTTATAACGTTTATGATGGCAAAAAGATATTAGCAAACTCGTTAAGAAACAAAAAGgttcttcttgttcttgatGATGTAAGTGAATTAAGCCAATTGGAGAATTTAGCCGGGAAGCAAGAATGGTTTGGTCCAGGAAGTAGAGTAATAATCACAAGTAGAGATAAGCACTTGCTAATGACACATGGAATGAATGAAACTTACAAGGCACAAGGCTTAGTTAAAAAAGAAGCACTTAAGCTCTTTTGTTTGAAagcattcaaacaaaatcaaccTAAAGAAGAGTATTTGAGTTTGTGTCAAGAAGTGGTTGAATATGCAAAAGGTCTTCCATTAGCACTTGATGTATTGGGTTCACATCTTTATGGAAGAACTGTTGAAGTTTGGCATAGTGCTTTAGAACAAATAAGAAGTGTTCCTCATTCCAAAATCCATGATACATTGAAAATAAGTTATGATAGCTTACAATCTATGGAGAAAAATATGTTTCTAGATATTGCTTGTTTCTTCAAAGGAATGGACATAAATGCAGTCATAGAAATATTGGAAGATTGTGGTGATTATCCCAAAATTGGAATTGACATTTTGATTGAAAGATCATTGGTAACTTTTGAAAGAGGGGACAATAAGTTGTGGATGCATGATTTGCTTCAAGAAATGGGAAGGAATATTGTGTTTCAAGAATCTCCGAAAGATCCTGGGAAACGCAGTAGGTTATGGTCTCAAAAAGACATTGATCAAGTATTGAGAAAAAATAAGGGAACTGATAAAATTCAAGGCATAGTTATGGACTTAGTTGAACCATATGAAGCAAGTTGGAGCATTGAAGCCTTCTCCAAAATAAGTCAGCTAAGATTTCTCAAACTATGTGAAATAAAACTTCCCCTTGGCCTCAATTGCTTGCCTAGTTCACTAAAAGTTCTTGATTGGAGAGGTTGTCCTTTGAAAACCCTGCCACTCAATAATCATTTGGATGAAATTGTTGATCTCAAATTGtctcatagcaaaatagaacaACTTTGGCATGGAACACAGtTTCTTGAAAATCTGAAGTCCATCAACTTGAGCTTTTCGAACTCTCTAAAGCAATCACCGGATTTTGTTGGTGTTCCAAATCTTGAATCATTGTTTCTTGAAGGTTGTGCAAGCTTAACTGAGATCCATCCCTCCCTTTTAAGCCACaaaaaacttctaatattgagtTTGAAAGGTTGCAAAAGGCTCAAAACTCTTCCATGTAAAATAGAGATGAGTTCCTTGAAGGTTTTACTTCTATCTGGTTGCTGTGAATTTAAACATTTTCCGGATTTCGATGAAAGCACAAAAAATCTATCACAGCTTTATTTAGAAGAGACTGCTATAACAAAACTACCATCTTCACTCGGATTTCTTGAATCTCTTACTcttttgaatttagaaaattgCAAGAATCTTGTTTGTCTTCCAGATACAATAAGTGAGTTGAAGTCCCTCTTAACTCTAAATGTTTCTGGCTGCTCGAAAATCCGTAGTTTTCCAGAAGGTCTAAAAGAAATCAAGTCTTTAGAGGAACTTTCGGCAAATGAAACTGCTATTGAAGAACTTCCTTCATCGGTTTTTTATCTCGAAAACCTCAAAGTAATATCATTTTCTGGATGCAAAGGAGTAGTTTCCAAGTCAGTGAATACATTTTTTCTACCCTTTTCACAGCTACTAGGTAGTCCACAAGAACCTGCTGGATTTAAATTGCCACCTAAGTTATATCTACCCTCTTTGgtgaaattaaatttaagttATTGCAATCTATCTGAAAAATCAATGCCAAAGGATTTTTCAAACTTATCTTCCTTGATTGCTTTAAATCTCGCCGGAAACAATTTTGTTAGTACACCAGGTTGCATTTCACAACTTCCAAAGCTTGAATATCTTGGCCTAAAGTGCTGTGAAATGCTTCAGACATTGTCAGAGTTTCAATCAAGTATGAGGTTTTTGGATGCAAGTAATTGTGGTTCATTTGAAACTTCCAAATCCAATCTATCTGGACCATGCAGTCTCTTTGCTTCGCATCCACAACGACACTCGCATTTATCAATAGTACTGGAGAGCTATCTGGAGGCACTGGAACTTGGTCTACCTAAAGCAAGATTTGACATGCTTATCACAGGGAGTGAAATTCCATCATGGTTTACACGTTCGAAATATGATACTTGTACACATATGGCAGTCCCTCATGATTATCCTCCAACTGAATGGGTGGGACTTGCTTTGTGTTTTATGTTGGTATGTTTTGATGATCAACCTGAGTTGTGTGATCATGAAGTAAGTTGTTACTTGTTTGGACCCAATGGTAAGTTGTTTATCAAAAGCCGGCATTTATCTCCTATGGAACCATATGTTCGTCACCTTTATATTCTCTATCTGTCCATCGATGAATGTCGTGAGAGATTTTGTGAAGGTGGTGACTGCAGTCAAATTGAATTTGTCTTGAAAACTTATTGCTGTAATGCATTGCAAGTAAAAAGGTGTGGTTCTCGCTTGGTATGCAAGCAAGATGTTGAAGATGTTTACAGAAATTATTGCTAG 2970 0.3525 MKVKRWREALREVASYSGWDSKDRQEASLVETMVEHIQKKLIPRLKVKDNLVGIDLRMKEVYSLLGMRLNDVRFIGIWGMGGIGKTTVARELFEAIKAEFKVSCFLADIRETISKTNGLVHIQSELLSHLDIRGNDFYNVYDGKKILANSLRNKKVLLVLDDVSELSQLENLAGKQEWFGPGSRVIITSRDKHLLMTHGMNETYKAQGLVKKEALKLFCLKAFKQNQPKEEYLSLCQEVVEYAKGLPLALDVLGSHLYGRTVEVWHSALEQIRSVPHSKIHDTLKISYDSLQSMEKNMFLDIACFFKGMDINAVIEILEDCGDYPKIGIDILIERSLVTFERGDNKLWMHDLLQEMGRNIVFQESPKDPGKRSRLWSQKDIDQVLRKNKGTDKIQGIVMDLVEPYEASWSIEAFSKISQLRFLKLCEIKLPLGLNCLPSSLKVLDWRGCPLKTLPLNNHLDEIVDLKLSHSKIEQLWHGTQFLENLKSINLSFSNSLKQSPDFVGVPNLESLFLEGCASLTEIHPSLLSHKKLLILSLKGCKRLKTLPCKIEMSSLKVLLLSGCCEFKHFPDFDESTKNLSQLYLEETAITKLPSSLGFLESLTLLNLENCKNLVCLPDTISELKSLLTLNVSGCSKIRSFPEGLKEIKSLEELSANETAIEELPSSVFYLENLKVISFSGCKGVVSKSVNTFFLPFSQLLGSPQEPAGFKLPPKLYLPSLVKLNLSYCNLSEKSMPKDFSNLSSLIALNLAGNNFVSTPGCISQLPKLEYLGLKCCEMLQTLSEFQSSMRFLDASNCGSFETSKSNLSGPCSLFASHPQRHSHLSIVLESYLEALELGLPKARFDMLITGSEIPSWFTRSKYDTCTHMAVPHDYPPTEWVGLALCFMLVCFDDQPELCDHEVSCYLFGPNGKLFIKSRHLSPMEPYVRHLYILYLSIDECRERFCEGGDCSQIEFVLKTYCCNALQVKRCGSRLVCKQDVEDVYRNYC 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01038 989 PRINTS Disease resistance protein signature 598 614 - -
Tsu08g01038 989 PRINTS Disease resistance protein signature 74 89 - -
Tsu08g01038 989 PRINTS Disease resistance protein signature 150 164 - -
Tsu08g01038 989 PRINTS Disease resistance protein signature 243 257 - -
Tsu08g01038 989 Pfam NB-ARC domain 70 294 IPR002182 GO:0043531
Tsu08g01038 989 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 48 590 - -
Tsu08g01038 989 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48 590 IPR044974 GO:0006952
Tsu08g01038 989 Pfam Leucine Rich Repeat 464 481 IPR011713 -
Tsu08g01038 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 302 IPR027417 -
Tsu08g01038 989 SUPERFAMILY L domain-like 363 684 - -
Tsu08g01038 989 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 571 982 - -
Tsu08g01038 989 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 571 982 IPR044974 GO:0006952
Tsu08g01038 989 Gene3D Ribonuclease Inhibitor 405 551 IPR032675 -
Tsu08g01038 989 SUPERFAMILY "Winged helix" DNA-binding domain 278 385 IPR036390 -
Tsu08g01038 989 Gene3D Ribonuclease Inhibitor 552 694 IPR032675 -
Tsu08g01038 989 Gene3D Ribonuclease Inhibitor 695 827 IPR032675 -
Tsu08g01038 989 Gene3D - 208 298 IPR042197 -
Tsu08g01038 989 SUPERFAMILY RNI-like 718 810 - -
Tsu08g01038 989 Gene3D - 1 38 IPR035897 -
Tsu08g01038 989 Gene3D - 39 203 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01038 Tsu-Chr8 11381288 11386597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01038 4 679 WRKY Transcription Factor Family AT4G12020 34.438 4.25e-107 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01038 - - gmx:100815486 1352.81