Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01027 ATGACAGTATACAATGCTGCTTTCATCAACACACAGCTCTCAAAACAAACATCAATCTTCGGTCTCCGTCTTTGGGTCCTCATCGGAATCCTTGTCGGTTCAATCATTGTCTTCACTCttttccttctctctctctgtctcacTTCACGCCGCCGCAAAAACCACCACAAAACCACTAAACTCAACCACCACTCTCCTATCATCTCTAAAGAAATCCAAGAAATCATCCACGCGCCGCCGTCATCTGAGATCCACCTCGTCGATACCGTCAAACTAGAACTCCATaacctcaacaacaacaacagtaacaaCCGTGTTGTTTCAACCAGTGGAGAGAGTAGAGGAAATGGTAGTGTGAGTGAAACGGCGTCGTCTTTTGGAAGTGTGGGACCTGAAGTTTCGCATCTTGGATGGGGGAGATGGTATACTCTTAGAGAACTTGAAGCTGCAACTAATGGTTTGAGTGAAGAAAATGTTATTGGTGAAGGTGGTTATGGTATTGTTTACAGTGGTGTTCTTCCTGATGGTGTCAAAATTGCTGTTAAGAATCTCTTGAATAACAAAGGCCAAGCTGAGAGAGAATTTAAAGTTGAGGTAGAAGTAATTGGTCGTGTGCGACACAAGAATCTTGTTAGGTTGCTTGGATACTGTGTTGAAGGTGCATACAGGATGCTTGTGTATGAATACGTCGATAATGGCAATCTAGACCAGTGGTTGCATGGAGATGTTGGACCTGTAAGCCCTATGACATGGGATATCCGGATGAACATTTTATTGGGCACAGCTAAAGGATTGGCTTATCTTCATGAGGGTCTTGAACCAAAAGTTGTTCACCGAGATGTGAAATCAAGTAACATACTCATTGATCGCCAATGGAATCCTAAGGTTTCTGATTTCGGTCTTGCTAAGCTTCTGCATTCTGACCACAGCTATGTCACGACTCGAGTCATGGGGACATTTGGTTATGTTGCGCCCGAGTATGCCTGCACTGGAATGCTGACCGAGAGGAGTGACGTGTATAGCTTTGGGATACTCATTATGGAACTAATCACCGGAAGAAGTCCGGTTGATTATAGCAGACCACAAGGAGAGGTTAATTTAGTTGAGTGGTTGAAAAATATGGTTGGAAGTCGAAAAGCCGAGGAAGTAGTTGATCCTAAGCTTCCGGAGAAACCATCTTCAAAGGCTCTTAAACGGGCTTTATTGGTTGCTCTTCGATGCGTTGATCCTGATTCCATTAAGAGGCCTAAAATGGGACAAGTGATCCACATGCTTGAGGCCGAAGATCTCTTATTTCGTGAGGATCGAAGAATCGCAGGAGAATCTTCTCATTCCAATCGTGATTATCAACGAGAGCATAAGGGTTCGAGTTTAGATAAAAATCAGATAGGTGGAGAGATCACTGATCAAAGTGATGATAGTAGTAGAAGTCACCATCAGCCTACTAGGTGGAGATGA 1458 0.4232 MTVYNAAFINTQLSKQTSIFGLRLWVLIGILVGSIIVFTLFLLSLCLTSRRRKNHHKTTKLNHHSPIISKEIQEIIHAPPSSEIHLVDTVKLELHNLNNNNSNNRVVSTSGESRGNGSVSETASSFGSVGPEVSHLGWGRWYTLRELEAATNGLSEENVIGEGGYGIVYSGVLPDGVKIAVKNLLNNKGQAEREFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLDQWLHGDVGPVSPMTWDIRMNILLGTAKGLAYLHEGLEPKVVHRDVKSSNILIDRQWNPKVSDFGLAKLLHSDHSYVTTRVMGTFGYVAPEYACTGMLTERSDVYSFGILIMELITGRSPVDYSRPQGEVNLVEWLKNMVGSRKAEEVVDPKLPEKPSSKALKRALLVALRCVDPDSIKRPKMGQVIHMLEAEDLLFREDRRIAGESSHSNRDYQREHKGSSLDKNQIGGEITDQSDDSSRSHHQPTRWR 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01027 485 MobiDBLite consensus disorder prediction 471 485 - -
Tsu08g01027 485 CDD STKc_IRAK 160 426 - -
Tsu08g01027 485 Pfam Protein kinase domain 156 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01027 485 ProSiteProfiles Protein kinase domain profile. 154 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01027 485 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 476 - -
Tsu08g01027 485 SMART serkin_6 154 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01027 485 MobiDBLite consensus disorder prediction 441 459 - -
Tsu08g01027 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Tsu08g01027 485 Gene3D Transferase(Phosphotransferase) domain 1 230 439 - -
Tsu08g01027 485 PANTHER OS01G0323000 PROTEIN 1 476 - -
Tsu08g01027 485 MobiDBLite consensus disorder prediction 101 126 - -
Tsu08g01027 485 SUPERFAMILY Protein kinase-like (PK-like) 130 426 IPR011009 -
Tsu08g01027 485 Gene3D Phosphorylase Kinase; domain 1 135 229 - -
Tsu08g01027 485 MobiDBLite consensus disorder prediction 441 485 - -
Tsu08g01027 485 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01027 Tsu-Chr8 11294468 11297841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01027 26 430 Trihelix Transcription Factor Family AT5G38560 40.000 1.81e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tsu08g01027 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01027 - - gmx:100777348 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04648 07 51068453 51070965 Tsu08g01027 08 11294468 11297841 PCT