Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01015 ATGGAGGAAGATTGGGATCTATTTGCTGTAGTCAGACCTTACATCACCATCACCCCTTCCTCCTCCTCCACtaccaccaccacaaccaccacaaTAGCCACCACCCCATCAACACCTTCATCTGGTTTTGAAACTTCAACATCTTACAACTTCTTCTCTCTTTACCCTGCAGAACAATCAAGTCAAGTACTTTTGCCACTTTCATATCCCTTTGAAGCAAAAAGTTCCATTCAAGAATTGCATGATATTTGCAAgcctttctttttcaaatcaCAACCTCTTTCTTCTAATTCATTCTCTTATTCATCACCATCACCAAAATCATCTCGAAAACCAAAACAACAGTATCTTAATAAGAACTCTCACCATGTTGCTTCTGCTGCTACTACCCCAAGATCTAAAAGAAGGAAGATTCAGCATAAGGAGGTATGTGAAGTGAAATATGAGAATCTTTCATCAGGTATATGGGCATGGAGGAAATATGGTCAAAAACCCATCAAAGGATCACCATATCCAAGGTCATATTATAGATGTAGCAGTTCAAAAGGGTGTCCAGCTAGAAAACAAGTTGAGCAGAAAAAATCAGACCCAACCATGTTTATCGTAACATTCACTGGTGAACATAGTCACCCTGCTCCAACTCATAGAAATTCTCTTGCTGGTTCAACAAGGCACAAGCCATTGTCACCAAAAACTATCACTGCTCAAGATTCTCCTCGACCCTTCCCAAAACAAATTTCTCCATCTACCTCAGGTGTTGAAGAGGAAAATCCTACACCCTCAAGTTCAAAATCATATAGTATTGAGGATTTGGAAGATTTGATGAAGGGTGATGATGTGGAAAGTGGATTTGAGCCATCTGAAATGGTTGATTTCTTTGAAGGTTTAGATGAATTTATAAGTATTTCCTAG 912 0.3739 MEEDWDLFAVVRPYITITPSSSSTTTTTTTTIATTPSTPSSGFETSTSYNFFSLYPAEQSSQVLLPLSYPFEAKSSIQELHDICKPFFFKSQPLSSNSFSYSSPSPKSSRKPKQQYLNKNSHHVASAATTPRSKRRKIQHKEVCEVKYENLSSGIWAWRKYGQKPIKGSPYPRSYYRCSSSKGCPARKQVEQKKSDPTMFIVTFTGEHSHPAPTHRNSLAGSTRHKPLSPKTITAQDSPRPFPKQISPSTSGVEEENPTPSSSKSYSIEDLEDLMKGDDVESGFEPSEMVDFFEGLDEFISIS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01015 303 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 300 - -
Tsu08g01015 303 SUPERFAMILY WRKY DNA-binding domain 154 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu08g01015 303 MobiDBLite consensus disorder prediction 207 283 - -
Tsu08g01015 303 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 300 IPR044810 GO:0003700
Tsu08g01015 303 MobiDBLite consensus disorder prediction 95 138 - -
Tsu08g01015 303 MobiDBLite consensus disorder prediction 210 268 - -
Tsu08g01015 303 MobiDBLite consensus disorder prediction 95 128 - -
Tsu08g01015 303 Pfam WRKY DNA -binding domain 156 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu08g01015 303 Gene3D WRKY domain 144 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu08g01015 303 MobiDBLite consensus disorder prediction 269 283 - -
Tsu08g01015 303 ProSiteProfiles WRKY domain profile. 147 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu08g01015 303 SMART WRKY_cls 152 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01015 Tsu-Chr8 11149739 11151202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01015 1 301 WRKY Transcription Factor Family AT4G01250 44.127 9.18e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu08g01015 WRKY 3.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01015 K13425 - gmx:100170675 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01015 08 11149739 11151202 Tsu01g04366 01 51539058 51540246 ECH
Tsu08g01015 08 11149739 11151202 Tsu08g01015 08 11149739 11151202 ECH
Tsu08g01015 08 11149739 11151202 Tsu04g02079 04 22908995 22910709 ECH
Tsu02g00418 02 3518224 3519725 Tsu08g01015 08 11149739 11151202 ECH
Tsu04g02079 04 22908995 22910709 Tsu08g01015 08 11149739 11151202 PCT