Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00989 ATGCCGAAGAACAAGGGAAAGGGAGGAAAGAATCGGAAGAGAGGAAAGAACGAAGCAGATGACGAGAAACGCGAACTAATTTTCAAAGAAGACGGTCAAGAATACGCTCAGGTGCTCCGTATGCTCGGTAACGGTCGTTGCGAGGCAATGTGCTTTGACGAAGATGGCGGAAAAAAGCGTCTCTGTCATATTCGTGGTAAGATGCATAAGAAAGTTTGGATTGCTGCCGGTGATATCATTCTCGTCGGTCTTCGTGATTATCAGGATGATAAATCTGATGTGATTTTGAAATATATGCCTGATGAAGCTAGGCTTCTCAAGGCTTATAGTGAACTTCCTGAACATATTAGACTTAACGAAGGTATTGCTGGTGGtcttgatgaagaagatgatgatgctAATGATTACATCGATTTTGAGGATGAAGATATTGATAAgatttaa 444 0.3919 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCFDEDGGKKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKSDVILKYMPDEARLLKAYSELPEHIRLNEGIAGGLDEEDDDANDYIDFEDEDIDKI 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00989 147 MobiDBLite consensus disorder prediction 1 25 - -
Tsu08g00989 147 Gene3D - 2 147 IPR012340 -
Tsu08g00989 147 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1A 1 147 - -
Tsu08g00989 147 SUPERFAMILY Nucleic acid-binding proteins 2 146 IPR012340 -
Tsu08g00989 147 PANTHER EIF-1A 1 147 IPR001253 GO:0003743|GO:0006413
Tsu08g00989 147 SMART eIF1neu4 28 113 IPR001253 GO:0003743|GO:0006413
Tsu08g00989 147 ProSiteProfiles S1 domain IF1 type profile. 22 99 IPR006196 GO:0003723|GO:0003743|GO:0006413
Tsu08g00989 147 CDD S1_IF1A 33 112 IPR001253 GO:0003743|GO:0006413
Tsu08g00989 147 TIGRFAM eIF-1A: translation initiation factor eIF-1A 14 113 IPR001253 GO:0003743|GO:0006413
Tsu08g00989 147 Hamap Translation initiation factor 1A [eif1a]. 16 113 IPR001253 GO:0003743|GO:0006413
Tsu08g00989 147 Pfam Translation initiation factor 1A / IF-1 32 96 IPR006196 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00989 Tsu-Chr8 10822078 10822752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00989 1 147 Eukaryotic Initiation Factors Gene Family AT2G04520 83.784 8.02e-83 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00989 K03236 - han:110911678 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00989 08 10822078 10822752 Tsu08g00989 08 10822078 10822752 ECH