Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00982 ATGGGAAACAGTGAGGATGGAAAATCCATTAAGATTGAAAAGCCTTCTTCACCTGTAACAACTgATCAGATCAATCAAACCAACCAGCATAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGGCATATTATGGGCAAAGAGTCAACATTCCACCATACTTCAACTCAACTGTTGCTTCTGGTCATGCACCTCACCCATACATGTGGGGACCGCCACAGCCTATGGTTCATCCATATGGGCCGCCTTATGCATCATTTTATCCACATGGAGGGGTTTATACTCACCCTGCGGTTGCCGTCGGGCCAAATTCACATGGTCAAGGAATACCATCTTCACCTGCTGCTGGGACTCCTTCAAGCATAGAGACACCAACCAAATCATCTGGAAACACTGATCATggtttaatgaaaaaattgaaaggaTTTGATGGGCTTGCGATGTCAATAGGCAACGGCAATGCTGAAAGTGCTGAGCGTGGAGCGGAAAACAGGCTATCACGGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTACTGGGGTGAGAAATTTCTTGctattatcattttttctcaCAGATGGAGAAGGAAAAACTGAGATGCAAGATACTCCAGTTTTGAAAGACATGACAGCTTCCAAAAAGACGGTGTTAGTTACTCCAACAAGTGTTGCAGAAAAATTTGTTGGACCTGTACCTTCTTCAGGTATGACTACAGCACCGGAGCTGAGGAACCCTTCGACCGTTTCCACCGGTGCTGCACAACCTTTTGGAGTTTTGCCTCCTGAAGCTTGGATGCAGAGTGAGCGTGAGCTGAAACGTGAGAGGAGGAAACAATCAAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCTGAGGCTGAAGAACTAGCACGAAGAGTTGATGCATTGACTTCTGAGAATTTGTTGCTGAAATCGGAAATGAATGAATTGGCTCAAAATTCTGAGAAGCTGAAGATGGAAAATGCTACATTAAAGGAAAAGCTGAAAAACACTCAACTAGGACAACCAGAAGAGATAATTTTGAACAGCATTGACAAGAGGGCTACACCTGTAAGTACAGAAAACTTACTATCAAGAGTTAATAATTCCAACACTGATGATAGAACTGCAGAAGAAGAGAATGGTTTCtgtgaaaacaaacaaaattctGGTGCAAAGCTGCATCAACTACTTGATACAAATCCTAGAGCTAATGCTGTTGCAGCTAGTTGA 1254 0.425 MGNSEDGKSIKIEKPSSPVTTDQINQTNQHNIHVYPDWAAMQAYYGQRVNIPPYFNSTVASGHAPHPYMWGPPQPMVHPYGPPYASFYPHGGVYTHPAVAVGPNSHGQGIPSSPAAGTPSSIETPTKSSGNTDHGLMKKLKGFDGLAMSIGNGNAESAERGAENRLSRSVDTEGSSDGSDGNTTGVRNFLLLSFFLTDGEGKTEMQDTPVLKDMTASKKTVLVTPTSVAEKFVGPVPSSGMTTAPELRNPSTVSTGAAQPFGVLPPEAWMQSERELKRERRKQSNRESARRSRLRKQAEAEELARRVDALTSENLLLKSEMNELAQNSEKLKMENATLKEKLKNTQLGQPEEIILNSIDKRATPVSTENLLSRVNNSNTDDRTAEEENGFCENKQNSGAKLHQLLDTNPRANAVAAS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00982 417 MobiDBLite consensus disorder prediction 106 133 - -
Tsu08g00982 417 MobiDBLite consensus disorder prediction 237 300 - -
Tsu08g00982 417 MobiDBLite consensus disorder prediction 374 417 - -
Tsu08g00982 417 SUPERFAMILY Leucine zipper domain 276 332 IPR046347 GO:0003700|GO:0006355
Tsu08g00982 417 SUPERFAMILY BLRF2-like 320 385 - -
Tsu08g00982 417 MobiDBLite consensus disorder prediction 271 300 - -
Tsu08g00982 417 MobiDBLite consensus disorder prediction 242 258 - -
Tsu08g00982 417 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 280 295 IPR004827 GO:0003700|GO:0006355
Tsu08g00982 417 Gene3D - 276 328 - -
Tsu08g00982 417 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 275 338 IPR004827 GO:0003700|GO:0006355
Tsu08g00982 417 MobiDBLite consensus disorder prediction 104 138 - -
Tsu08g00982 417 SMART brlzneu 273 337 IPR004827 GO:0003700|GO:0006355
Tsu08g00982 417 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 417 IPR044827 GO:0003700|GO:0006355|GO:0043565
Tsu08g00982 417 Pfam bZIP transcription factor 273 335 IPR004827 GO:0003700|GO:0006355
Tsu08g00982 417 MobiDBLite consensus disorder prediction 1 26 - -
Tsu08g00982 417 Coils Coil 286 341 - -
Tsu08g00982 417 MobiDBLite consensus disorder prediction 168 183 - -
Tsu08g00982 417 Pfam Disordered region downstream of MFMR 133 254 - -
Tsu08g00982 417 PANTHER G-BOX-BINDING FACTOR 3 1 417 - -
Tsu08g00982 417 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Tsu08g00982 417 MobiDBLite consensus disorder prediction 151 183 - -
Tsu08g00982 417 CDD bZIP_plant_GBF1 278 326 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00982 Tsu-Chr8 10767475 10771473 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00982 1 416 bZIP Transcription Factor Family AT2G46270 48.694 1.48e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu08g00982 MFMR_assoc 3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00982 K09060 - gmx:778133 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00982 08 10767475 10771473 Tsu08g00982 08 10767475 10771473 ECH