Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00971 ATGGGATGGCCTTTTATTGGGAACCTATGGCCCTTCTACAAATCTCTCTCATCCAATCACCGTGATACATTCATCAACAACATTGTTCACAAATATGGACGAACTGGTATCTACAAGACACATTTGTTTGGGAGTCCTTGCATCATTGTCACTGGACATACAATTGCCAACAAAGTGTTGAGAGATGATGTAAACTTTAAGCTTGGTTATCCAAAAGCTACCGTTGAACTAATAGAAAGTAAACCCTTAATTAATGAACACAGACGTTTTAAACGATTAATCACAGCTCCTATTGCTGGTTACAATGCATTAGAAAGGCATTTAGAGTTTATTGAGGATATTGTGATCAATAAGCTAGAAGAATTGTCCAACATGAAACATCCTATCGAGTTCTTGAAGGAAACGAGGAAGATTACCTTTAAAGTTTTCTTTCATATTATCATGGGCTCTTGTGATCAACGTATTGTTAATAAATTTGGAGATTTATTTGATGTTATGTCTATTGGACTCTTCTCTTTGATGCCCATAAATGcacctttttttcctttcaacaaagCATTCAAGGCACGTAAGAAaaaaactaagGAAGAGCAAGAAGAAATCATGAAAGCAAGAGCATCCTCGCAAAAACGATTAAGTAttaaggaaattaaaaaaatggtttatcTTTCTCAGGTTATTGATGAAACATTAAGGCATGCCGATATCTTTTCTGTTTTTCGAGAGGCAACAACTGATTTGAACATCAATGgttttttcatACCAAAAAGGATGGAAAGTATAGATGGAATGATTATAATTCAGCAACAGGAACCTTTATGCCTTTCGGAATAG 834 0.3297 MGWPFIGNLWPFYKSLSSNHRDTFINNIVHKYGRTGIYKTHLFGSPCIIVTGHTIANKVLRDDVNFKLGYPKATVELIESKPLINEHRRFKRLITAPIAGYNALERHLEFIEDIVINKLEELSNMKHPIEFLKETRKITFKVFFHIIMGSCDQRIVNKFGDLFDVMSIGLFSLMPINAPFFPFNKAFKARKKKTKEEQEEIMKARASSQKRLSIKEIKKMVYLSQVIDETLRHADIFSVFREATTDLNINGFFIPKRMESIDGMIIIQQQEPLCLSE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00971 277 Pfam Cytochrome P450 195 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00971 277 PANTHER CYTOCHROME P450 26 192 257 - -
Tsu08g00971 277 SUPERFAMILY Cytochrome P450 2 257 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00971 277 PANTHER CYTOCHROME P450 88D6 1 194 - -
Tsu08g00971 277 PANTHER CYTOCHROME P450 26 1 194 - -
Tsu08g00971 277 Gene3D Cytochrome P450 211 267 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00971 277 PANTHER CYTOCHROME P450 88D6 192 257 - -
Tsu08g00971 277 Gene3D Cytochrome P450 1 210 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00971 Tsu-Chr8 10692071 10697870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00971 192 256 Cytochrome P450 AT2G32440 56.061 2.37e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00971 K04123 - mtr:MTR_4g005260 240.35