Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00964 ATGGATAATGATGAATGGGATCTCATGTCCATTGTGAATAGCTGCAAAGCTACAACCTTTACTGATCCTACTATCATTTTTGAAACTTCACCTTCACCTCAAACCCCAATTACCATCACAGCCAATGACGTTATAACCCCTCAAAACACCACACCATCTTACTTTAACGACTTTACTGTTATCGAAGAAAATAACCTAGACCTTTTTAACCCACAAAAACCAACTGACTTCATAGATCTAGAGAAGTTGAGAATCAATTTCAATCGCAACAACACTCACCTCATCCCTACAACAATTATCCCCcacaccaccaccatcaccacccCCACCACCTCTTCCCCCATATCGATCACCACTACTCTCACCTCGTTGATTACCACCACAACTGCTCCTTTTGACCGTGTGTACAACCATCAATCAGTTCCACAACAACTCCTAACACAACAAAATCAACTACCAATTCTACTACCCCAAACCCCAATtaccatcaccaccaccaataACATTATACCCACTCAAAATACCACATCATCTTACTTTAAAGAATTTTCTGTTATCCAAGAAAATAATTCATTGCATTATATCCCACTGAAACCTACTGCCTTCACAGATCTAGAGAACTTAAGAGTTAATTTCAATCACAACATCACTCTCCCCATCCTCACCACCGTCACGACCCATACAACCTTTATCCCAACTATACTTACCACCACCTCTTCTCCCATAACGACCATAACTACTCCCACCTCCTTGACTACCAACATCCCCACCTACAATATGATTGTTCATGCTGACCATGCTCATAATCATTCGTCGGTTCCAACACAACCCCAAATACAACACAATCAACTACAAATTCTACCATCCCAAACCCCAATTACCACAAGCACCATCACCGATAACATCGTATCTCCCCAAAACACTGCTCCATCTTATTTTGACAGTTTTACATTTATCCAAGAAAATAACTCAGTCCCTTTGGCCCCACTTAAACCAACAGAATTTGTTGATCTAGACAAATTGAGAATCAATTTCAATCACAACACCACTCTCCCCACCCCTACAACAATTATCCCCAACCCCGCCACCATCACAACGCCCACTACCTCTATCCCAACCATACTTACCACCACCACCTCTTCTCCCATAACGACCACAACTACTCCCACCTCCTTAACTACCACCATCCCCACCTACATAACAACTGATCATGCCAACAATCAACTACAACTTCTACTACCCCAAACCTCAATTACTGCAACCACCATCACCTCCACTAATAATATCATATCCCCTCAAAACACCACACCATCTTACTTTGACCGTTTTACTTTTATCCAAGAAAATAACTATGTCACTTTGTCTCCACTTGAACCAATTGAATTCGTCGATATAGACAAATTGAGAATCAATTTCAATCACAACACCACTCTCCCTACCCCTACAACGAATATCACTAATCCCATCACCATCAAGACCCCCACCACCTCTATCCCAACCATTATTTCCACTACCTCTAACCCCATCTTCACCGCCACTATTCCTGTCTCGTCGACTCCCACCATCCACACCCATAACACAACTTCTCATTTTGACCTTGGGTACAACAATCCATTAGTTCCACAACAAACTCCAAGACAGTGCAATCAACTACCAATTCTACTAACCCGGCCTAGTTCTAGGGTTTTACCAAATACATATCCACAAcaaccaaaattcaaatcaagAAAAAGAAAAAATTATAAGGAGTGGTCATTGGAGTGTCATGTAAAGGAGGATGAACTTTCAAAAGATTGGTGGACATGGAGAAAATATGGACAAAAATTTATTAAAGGGTCTCCACATCCAAGGAGCTACTACAAATGTAGCACTTCTAAAGATTGTTTGGCAAGAAAAGTAGTAGAAAAAAGCAACACTATGAGGAACACTTATGTTGTGACATATATTGAATCTCACAATCATGAAAAACCAGTAGTTAATCGGAGATCTAGATGGTTAAGCTACCAATCTTCTCAAAGCTCTCAAATGGGTGAGAATTAG 2040 0.3941 MDNDEWDLMSIVNSCKATTFTDPTIIFETSPSPQTPITITANDVITPQNTTPSYFNDFTVIEENNLDLFNPQKPTDFIDLEKLRINFNRNNTHLIPTTIIPHTTTITTPTTSSPISITTTLTSLITTTTAPFDRVYNHQSVPQQLLTQQNQLPILLPQTPITITTTNNIIPTQNTTSSYFKEFSVIQENNSLHYIPLKPTAFTDLENLRVNFNHNITLPILTTVTTHTTFIPTILTTTSSPITTITTPTSLTTNIPTYNMIVHADHAHNHSSVPTQPQIQHNQLQILPSQTPITTSTITDNIVSPQNTAPSYFDSFTFIQENNSVPLAPLKPTEFVDLDKLRINFNHNTTLPTPTTIIPNPATITTPTTSIPTILTTTTSSPITTTTTPTSLTTTIPTYITTDHANNQLQLLLPQTSITATTITSTNNIISPQNTTPSYFDRFTFIQENNYVTLSPLEPIEFVDIDKLRINFNHNTTLPTPTTNITNPITIKTPTTSIPTIISTTSNPIFTATIPVSSTPTIHTHNTTSHFDLGYNNPLVPQQTPRQCNQLPILLTRPSSRVLPNTYPQQPKFKSRKRKNYKEWSLECHVKEDELSKDWWTWRKYGQKFIKGSPHPRSYYKCSTSKDCLARKVVEKSNTMRNTYVVTYIESHNHEKPVVNRRSRWLSYQSSQSSQMGEN 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00964 679 SMART WRKY_cls 596 656 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu08g00964 679 Pfam WRKY DNA -binding domain 598 655 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu08g00964 679 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 417 663 - -
Tsu08g00964 679 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 417 663 IPR044810 GO:0003700
Tsu08g00964 679 SUPERFAMILY WRKY DNA-binding domain 592 657 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu08g00964 679 Gene3D WRKY domain 585 658 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu08g00964 679 ProSiteProfiles WRKY domain profile. 591 657 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00964 Tsu-Chr8 10629266 10632029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00964 574 657 WRKY Transcription Factor Family AT5G52830 58.333 1.07e-26 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu08g00964 WRKY 1.8e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00964 - - mtr:MTR_8g067635 203.756