Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00962 ATGGATCAATTTAGACAGATTGGTGAAGCACTTGGAAGTTTAAAGGCTGTGATGGTGTTTAGAGAGAACATTCAAATCAATCAGAGACAATGTTGTCTTCTTCTAGATGTTTTTAACAGTGCATATGAATCTATTGCAGATGAGGTCATACATAAtctaaaatttgaagaaaagaatGGAAAGTGGAAGGTTCTAGAACAGCCCTTAAGAGAGATACATAAGATTTTCAAAGAAGGAGAGGTTTACATTAAGCATTGTTTAGAAATAAAGAATTTTTGGGCTAAAGCCATTACCTTGTGTCATAACACAGATTGTGTTGAGTTTTACATACACAATTTGCTTTGTAGCATGCCTATTGTGATCGAAGCTATTGAATCAGCTGCGGAAACATCAGGTTTGGATCTCGAAGAGATGCAAAGGAAGAGGCTTATCAATTCCAATAAGTATATAAAAGAATATAGAGACATGAAGCTTTTCAAGTGGAAATTTGGGAAGCAGTATCTCCTTACTCAGGATTTGTGTAACCGTTACGAAACGAGTTGGAAGGAAGATAGATGGTTTCTTTTCAACAAAATCCATGAAAAGAAAGTGTCAGATGCAACAAAGTATCAGAAGAAATTAGTAGATTTACTTTTGAGGAATTTGGAAGTGTCGGAAACGTTGGAAGCTAAGCTTTTCCCAAGTTCACTATTGGTTGGTTCTAAGGACTATCAGGTGAGGAGAAGAATGGGGAATGGAAGTCAATACAAAGAGATTCAATGGTTAGGCGAAAATTTTGTTGTAAGACATTTTTCCGGTGACATTGAAGCTTTGGAAGGTGAGATCAAAGAGCTTTTATCGCTTTCACATCCAAATATAATGGATTGTCTTTGTGGTTTTACTGATGAGGAGAAGAAAGAATGCTTTTTGTTGATGGAATTGATGAGCAAAACTCTTAGCACGCATATTAAAGAGATTCATGGTCCGAGGAAGCGTTTACCGTTCTTGCTTCATGTCGCAGTTGATCTTATGCTTCAGATTGCGCGAGGAATGGAATATCTCCATTCAAAGAAAATGTATCATGGAGAATTAAACCCTTCAAACATTCTTGTTAAGCCTAGAAGTACCTCGCCAGAAGGTTACTTGCACTCCAAGGTATCAGGGTTTGGTTTATCTTCTGTTAAGGACTTGAACCAGAAAGGGAATGCAAATCAAAATGGAAATCTCTCATTCATTTGGTACTCTCCAGAGGTACTTGAAGAGCAAGAACATTTGGGAGGCGGATTAATTTCCAGGTACACGGAGAAATCAGATGTGTATAGTTTTGGAATGGTTTGTTTTGAGCTTCTAACCGGTAAAGTCCCTTTTGAAGATAGTCATCTTCAAGGGGAGAAAATGAGCAGAAACATAAGGGCAGGAGAAAGGCCACTTTTTCCACTTCATTCGCCAAAATATGTTATAAACTTGACGAAAAGATGTTGGCATACCGATCCAAACCAACGTCCGAATTTCTCATCCATATGTAGAGTTCTTCGTTATATAAAAAGATTTCTTGCATTGAATCCTGGTTACAATAAAGAAACAGATCCACCACCAATTCCACCTGTAGATTACTGTGATATAGAGTCGGCACTTTTGAGGAAGTTTCCTTCTTGGGGAAGTTCTGAATCATCGACGATATCTAATATTCCTTTTCAAATGTTTGCATATCGAGCCATCGAGCGAGAAAAAATGAGTACCGGCTGTAAGGAAAACTCTGAATCTGGAAGTGAAGCTTCAATCTGCGGTGATGAACTTGTTACTTCTGGAGATGAGACAAATCTAACAGTAACAGAAAAGAAAACTTCAGCTGCACAAGAGATTATCAACAGAAGGAAGCTTACACTGACCAGGAAATCACTAGATTCGAGGATGAAACCAGGTATGCTGAAAGGGAGATTAGAAAGACCTCCACAAATGTCCCCTCGATTGCGAAGCTTGCGAGTTAATTCAGATAAACATCTAATACCAAGTCCAAGGCCAAGGATAATAAGAAGATCTTCTTCTGGTCATgtctcagactctgagctaaCTTAG 2055 0.3757 MDQFRQIGEALGSLKAVMVFRENIQINQRQCCLLLDVFNSAYESIADEVIHNLKFEEKNGKWKVLEQPLREIHKIFKEGEVYIKHCLEIKNFWAKAITLCHNTDCVEFYIHNLLCSMPIVIEAIESAAETSGLDLEEMQRKRLINSNKYIKEYRDMKLFKWKFGKQYLLTQDLCNRYETSWKEDRWFLFNKIHEKKVSDATKYQKKLVDLLLRNLEVSETLEAKLFPSSLLVGSKDYQVRRRMGNGSQYKEIQWLGENFVVRHFSGDIEALEGEIKELLSLSHPNIMDCLCGFTDEEKKECFLLMELMSKTLSTHIKEIHGPRKRLPFLLHVAVDLMLQIARGMEYLHSKKMYHGELNPSNILVKPRSTSPEGYLHSKVSGFGLSSVKDLNQKGNANQNGNLSFIWYSPEVLEEQEHLGGGLISRYTEKSDVYSFGMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPLHSPKYVINLTKRCWHTDPNQRPNFSSICRVLRYIKRFLALNPGYNKETDPPPIPPVDYCDIESALLRKFPSWGSSESSTISNIPFQMFAYRAIEREKMSTGCKENSESGSEASICGDELVTSGDETNLTVTEKKTSAAQEIINRRKLTLTRKSLDSRMKPGMLKGRLERPPQMSPRLRSLRVNSDKHLIPSPRPRIIRRSSSGHVSDSELT 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00962 684 SUPERFAMILY Protein kinase-like (PK-like) 228 511 IPR011009 -
Tsu08g00962 684 PANTHER SERINE-THREONINE PROTEIN KINASE 2 626 - -
Tsu08g00962 684 Pfam Protein tyrosine and serine/threonine kinase 268 503 IPR001245 GO:0004672|GO:0006468
Tsu08g00962 684 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-LIKE 2 626 - -
Tsu08g00962 684 MobiDBLite consensus disorder prediction 623 684 - -
Tsu08g00962 684 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Tsu08g00962 684 ProSiteProfiles Protein kinase domain profile. 237 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00962 684 MobiDBLite consensus disorder prediction 623 637 - -
Tsu08g00962 684 Gene3D Transferase(Phosphotransferase) domain 1 233 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00962 Tsu-Chr8 10601106 10603386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00962 274 504 MAP Kinase Kinase Kinase AT5G58950 30.213 1.91e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Tsu08g00962 PK_Tyr_Ser-Thr 6.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00962 - - gmx:100813704 1110.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00962 08 10601106 10603386 Tsu08g00962 08 10601106 10603386 ECH