Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00948 ATGGAGGCCCTCAATTCTACTGTTTTCACCCCCCTTTCAGTGCTTTCTGACAGAACAAAATTTTCATCACACCCAACAATTTCTTCTTGCAAAGTTTCAAACTTTTCCACttcaatcaacaaaaaacacaatCTAAAAGAGTTTTTATCAAAGAATTTTCAAAAGGGTCTTTTCCTTGCTACAGCTTCAGTTGTGAATGTTAACAATGGTGAATTTGCAAATGCTTTAACATATGAAGAAGCATTAGGACTATCTCCAAGTGCTTCTTCTGGTGGTGACATTGATCTTAATGGTTTTGTAGATAGTGTCATAGGTTTTGCAACTGAGAATCCTTTAGTTCTTGCTGGTGGTGTAGCTATTTTAGCAGTGCCATTGATTTTTTCTCAGATTTTGAAGAAACCTAAGCCTTGGGGTGTTGAATCAGCTAAGAATGCTTATGCTAAATTAGGTGCTGATGGGAATGCTCAGTTGATTGATATCAGAGGTTTGGCTGAGATTAGGCAAGTTGGTGGTCCAAATGTTGGTGGTTTGAAGAAGAAATCGGTGTCGATCGCTTATAAAGGTGACGATAAGCCGGGGTTTTTAAAGAAGATTTCCTTGAAGTTTAAGGAACCTGAGAATACTACATTGTTTATTCTTGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAATTAGTCACCCTTAACGGATTTAAATCTGCTTATGCAATTAAGGATGGTGCGGAAGGACCACAAGGATGGCTGAATAGTGGCCTTCCTTGGATTGAACCAAAGAAAGCATTGAGCTTTGATTTTGGCAGTTTGACAGATACTATCAATGAAGCACTCGGAGAATCTGATGGCTTGGCTGTTACTCTTGGGATTGCTGCAGCTACTGGAATTGGTGCATTAGCTTTTTCTGAGATAGAAACAATTCTCCAACTAGTAGGATCAGCTGCGATTGTTCAGTTTGCGAGTAAGAAGTTTCTATTTGCTGAGGACCGGAAGAAAACACTAAAACAAGTTGAGGATTTCTTGAACACCAAGGTTGCTCCTAAGGAACTTGTTGATGAAATAAAGGACATTGGAAAGGCTCTTCtaccaacttccactagcaatAAGGCTCTTCCCACACCAACGGAAAATATTCCAGAGCTCGCTACAGCTGGTGGCACCGTACAGAAAACAGAAGCTACTCCCGAAACTGTATCCGAGATCAAAGCAGAAGCAGCAGTGGAACCTGTGATCAAAGTAGAAGCAGCTGCAGAACCTGAGGCCAAAGTAGAAGCGGCAGCAGAACCTGAGCCCAAAGTAGAAGCAGCAGCAGAACCTGCTCCGGAAATACACTCCGTGCCGAAAATTGAAGCTGAGGCAAAGTCAATTCCTGTGCAGTCTAGACCACTTTCACCATACCCATATTATCCAGATTTCAAACCTCCATCATCTCCATCTCCTTCAAAGCCCTAG 1449 0.4065 MEALNSTVFTPLSVLSDRTKFSSHPTISSCKVSNFSTSINKKHNLKEFLSKNFQKGLFLATASVVNVNNGEFANALTYEEALGLSPSASSGGDIDLNGFVDSVIGFATENPLVLAGGVAILAVPLIFSQILKKPKPWGVESAKNAYAKLGADGNAQLIDIRGLAEIRQVGGPNVGGLKKKSVSIAYKGDDKPGFLKKISLKFKEPENTTLFILDKFDGNSELVAELVTLNGFKSAYAIKDGAEGPQGWLNSGLPWIEPKKALSFDFGSLTDTINEALGESDGLAVTLGIAAATGIGALAFSEIETILQLVGSAAIVQFASKKFLFAEDRKKTLKQVEDFLNTKVAPKELVDEIKDIGKALLPTSTSNKALPTPTENIPELATAGGTVQKTEATPETVSEIKAEAAVEPVIKVEAAAEPEAKVEAAAEPEPKVEAAAEPAPEIHSVPKIEAEAKSIPVQSRPLSPYPYYPDFKPPSSPSPSKP 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00948 482 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 482 - -
Tsu08g00948 482 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 136 257 IPR036873 -
Tsu08g00948 482 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 482 IPR044240 -
Tsu08g00948 482 MobiDBLite consensus disorder prediction 419 482 - -
Tsu08g00948 482 MobiDBLite consensus disorder prediction 462 482 - -
Tsu08g00948 482 MobiDBLite consensus disorder prediction 419 436 - -
Tsu08g00948 482 Gene3D - 137 267 IPR036873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00948 1 472 Sulfurtransferasese or Rhodanese AT4G01050 56.224 1.94e-151 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00948 K17525 - gmx:100784482 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00948 08 10396435 10401734 Tsu08g00948 08 10396435 10401734 ECH