Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00938 ATGAAATCTATTTTACCTGCAAATCAGACtgatgatgagaatgaagaatCAATTTGGTCTTCATATGATTCCTGGCTAGAAAAGTATCCTTCAGCATTGGAAAATTTTGAGAAAGTGATGAACAttggaaaagagaaaaaaattgttgttttcttaGATTATGATGGAACACTCTCTCAAATCGTAGACGATCCGGATAAAGCTTACATGACCGATGCTATGCGTGCGGCCGTCCGCGAAGTTGCTAATTATTTTCCTACTGCCATTGTTAGTGGAAGGTGTAGGAATAAGGTTTATGATTTtgtgaaattgaaaaatatccATTATGCTGGAAGTCATGGAATGGATATATCAACTCCACAAGGGTCATCCAAGTATCAAGATAAGAAGCATCAACAAAAAGCTGTTGATGAAAAGGGTAATGAAGCTGTCCTTTTTCATCCAGCAAAAGAATATTTGCCAACAATCCAAGAGATTGttaagattttaaaagaaaatataacaGTAATAACGGGCTCTACTATTGAAGACAATATATTTTGTGTCACGGTACATTACCGTCGTGTGAGAAATGAAAAGGATATTGAATTTCTCAAAGAAATTGTTGAATCAATTGTGAAAGATTACCCTAATTTTCACATATCTGGAGGAAAAAAGgtTTTCGAGATACGCCCAAATGTAAAATGGAATAAAGGTCATGCTCTAATGTATTTGCTTGACACTCTTGGATTTGACAACTATGACGATGTTTTACCAATGTACATTGGAGATGATAGGACGGATGAAGATGCTTTCAAGGTTATAAGACAAATTGGAGGAGGTTTTCCAATTATTGTTTCTTCAATTGCTAGGGAGACAAATGCTTCATATTCTCTGCGTGACCCTGCTGATGTTATGACTTTCTTGATTCATTTAGCAAAATGGAAGAAGAATTTGATGAAGAAAACTAAAGAGAGAAAGTGA 963 0.3271 MKSILPANQTDDENEESIWSSYDSWLEKYPSALENFEKVMNIGKEKKIVVFLDYDGTLSQIVDDPDKAYMTDAMRAAVREVANYFPTAIVSGRCRNKVYDFVKLKNIHYAGSHGMDISTPQGSSKYQDKKHQQKAVDEKGNEAVLFHPAKEYLPTIQEIVKILKENITVITGSTIEDNIFCVTVHYRRVRNEKDIEFLKEIVESIVKDYPNFHISGGKKVFEIRPNVKWNKGHALMYLLDTLGFDNYDDVLPMYIGDDRTDEDAFKVIRQIGGGFPIIVSSIARETNASYSLRDPADVMTFLIHLAKWKKNLMKKTKERK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00938 320 SUPERFAMILY HAD-like 49 311 IPR036412 -
Tsu08g00938 320 Gene3D - 130 226 - -
Tsu08g00938 320 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 319 - -
Tsu08g00938 320 TIGRFAM T6PP: trehalose-phosphatase 46 306 IPR003337 GO:0003824|GO:0005992
Tsu08g00938 320 Gene3D - 50 292 IPR023214 -
Tsu08g00938 320 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 50 270 IPR006379 -
Tsu08g00938 320 Pfam Trehalose-phosphatase 51 295 IPR003337 GO:0003824|GO:0005992
Tsu08g00938 320 CDD HAD_TPP 49 299 - -
Tsu08g00938 320 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 319 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00938 Tsu-Chr8 10279166 10281913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00938 44 306 Trehalose Biosynthesis Gene Families AT1G70290 24.555 2.09e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00938 K01087 - cam:101508225 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00938 08 10279166 10281913 Tsu08g00938 08 10279166 10281913 ECH