Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00928 ATGTTCGGATTCCTTTATCCTAAAACCGGAGTGATTAATATTGACGTTCTAACACATACCGGTGTCGTATACTATGCATTCCTCACTGGTTTGGAGATGAATTTGGATACCATTTTACATGTAAAAAAGAAAGCCGTAACCATTGCGGTTTCGGGGTTCATCTTTCCAATGTTGATGGGACCGGCTTTATACACTCTACATCGAAAAGTTTATAGCAATGGTGAGAAATACCCACTTGAAGAAAGTAATATGAATGCTTATGTATTATGGACTGTAGTTCTCACTGTGACAGGTTTCCCAGTTGTAGTTCACTCACTTACTGAGCTTAAACTTCTTTATACTCGTCTTGGTAAGATTGCAATAACAACAACTATGATAAGTGACACATATGCTTGGATTTTATTCACATTAGTTGTTCCATTTTCAATTAATGGTACAAAGGCAATATACTCAGTATTAGGTACCATAATATTTGCTTTCATTTGCATCTATGTGGTGCGTCCTATCATCGTAAAAGTCATTGATCGCAAGACAGAAAGAGATGAATGGGATGATAACCGATTACTCTTTGTTGTGATGGGAATTTTTGTTTGTGCATACATAACAGATACTCTTGGAACACATGGCATTGTGGGGGCTTTTGTGTACGGGTTGATTTTACCTCACGGTAAATTTGCTGACATGGTGACATCAATGACTGATGATTTTGGTAGTGCATTTTTAGCACCGCTTTTCTTTGGTGGAACTGGAATGCGTCTCTCGTTTAATATCATTTTCAACCAACCAAATTGGCCTTTATCGCTCATGGTTATAATCTTGTTGTGTGTTCCAAAGATTTTAAGCACATTATTTTCCACTTTCTTTTTTGGCATGCTTACTCGTGACGGTTTTGCTCTAGGCATAATTCTTAATACCAAGGGTGCCACTGCACTAATTATGCTCAATACGGCTTATGATAAATCGATTATTTCTGTACCAACATATACTGTCATAACCTTTGCAGTCCTTTTAATGACTATAGTGGTGCCTCCTATCATCAATATCATATATAAGCCCAGAAAACAATTTGAGCAAAACAAGCTAAAGACTATACAAAAGTTAAGACTTGATGCAGAGCTCAGGATTCTAGCATGTGTTCATAATACTCGCCAGGCTGCAGGGATTATCAGCCTTATTGAATCTTTCAATGCAACCAGACTTTCACCAATACATGTTTTTTCACTTTACCTTGTCGAGCTCACAGGGCGTGCTGGTGCACTTGTTGCTGCTTATATGGAGAAGCCTAGTGGCCAGCCTGGAGCACAAAATCTTACAAGATCTCAAGAAGAACTAGAAAGCATTAACAATACCTTTGAAGCATTTGGTGAGGCATATGATGCTGTTAGAATCCAAACTTTAAATGTTGTGTCAGCCTATGCAACCATTCATGAGGACATATTCAACTCGGCTAAAGaaaagcacacaagcttgattATCCTTCCATTCCACAAACAACTAAGTTCAGAAGGCGCACTAAAAACTACTAGTATTGCATACAGAGATATAAACCTGAATGTGAtgcaaggtgcaccttgctcTGTGGGAGTCTTTGTTGATCGTGATATTGGGCCGCTACCTAAAATGAAGTTTGGTATTTGTATGATCTTTGTTGGAGGTCCCGACGATCGTGAAGCCTTAGCTATTGCTTGGAGGATGGCTGGGCACCCAAGAGCCCAATTATCAGTGGTTCGAATGCTCCTATTTGATAAAGCTGCAGAAGTATACACCTCAAGTCATGCTAAAACACAAGGAATACTCTCTGTTGTAATGGATAATGAGAAGCAGAAAGATTTAGACGACGAGTATGTGTATTCCTTTAGACTGATTGGAGTGAATAACAATGATTTTATATCCTATTCAGAGGTTGATGTTCATTCAGTTGAAGATATTCCTACAATACTCAACGGGCTAGAAAAATTTGGCTACGATTTATATATAGTTGGACAAGGGAATCGTAGGAACTCTCatgttttttcaaatttattagaATGGTGTGATTGTTCAGAACTTGGAGTATTAGGGGATATGGTGGCATCAGAAAATTTTGGTTTGCGTTCATCTGTGCTAGTTGTGCAACAATATGGGTATGGAGGAATGGTTTTGGGAAAGCAATCTGATCATGTGATCACAAAAAATGATGGTTTTGAGGCCCTTGTC 2196 0.3757 MFGFLYPKTGVINIDVLTHTGVVYYAFLTGLEMNLDTILHVKKKAVTIAVSGFIFPMLMGPALYTLHRKVYSNGEKYPLEESNMNAYVLWTVVLTVTGFPVVVHSLTELKLLYTRLGKIAITTTMISDTYAWILFTLVVPFSINGTKAIYSVLGTIIFAFICIYVVRPIIVKVIDRKTERDEWDDNRLLFVVMGIFVCAYITDTLGTHGIVGAFVYGLILPHGKFADMVTSMTDDFGSAFLAPLFFGGTGMRLSFNIIFNQPNWPLSLMVIILLCVPKILSTLFSTFFFGMLTRDGFALGIILNTKGATALIMLNTAYDKSIISVPTYTVITFAVLLMTIVVPPIINIIYKPRKQFEQNKLKTIQKLRLDAELRILACVHNTRQAAGIISLIESFNATRLSPIHVFSLYLVELTGRAGALVAAYMEKPSGQPGAQNLTRSQEELESINNTFEAFGEAYDAVRIQTLNVVSAYATIHEDIFNSAKEKHTSLIILPFHKQLSSEGALKTTSIAYRDINLNVMQGAPCSVGVFVDRDIGPLPKMKFGICMIFVGGPDDREALAIAWRMAGHPRAQLSVVRMLLFDKAAEVYTSSHAKTQGILSVVMDNEKQKDLDDEYVYSFRLIGVNNNDFISYSEVDVHSVEDIPTILNGLEKFGYDLYIVGQGNRRNSHVFSNLLEWCDCSELGVLGDMVASENFGLRSSVLVVQQYGYGGMVLGKQSDHVITKNDGFEALV 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00928 732 PANTHER CATION/H+ EXCHANGER 3 2 720 - -
Tsu08g00928 732 Gene3D - 1 359 IPR038770 -
Tsu08g00928 732 Pfam Sodium/hydrogen exchanger family 12 349 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu08g00928 732 PANTHER CATION/H + ANTIPORTER 2 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00928 Tsu-Chr8 10175177 10177623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00928 5 707 Antiporter Super Family AT2G13620 35.524 1.25e-162 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00928 - - gmx:100804266 1065.83