Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu08g00881 | ATGATTTGTTTCCTCATTCAACACATCTACAGCTTCATGTGCATCAGTCCACACTTAAATTCAGGATTTGCTTTTGTCTATTATGAAGATGAGCGTGATGCTGAAGAAGCAATTCGTGCACTTGACAATGTTCCATTTGGTCATGATAAGCGACGATTGTCTGTGGAGTGGGCTAGGGGTGAACGTGGGCGTCATCGTGATGGTTCAAAGGCAAACCAAAAGCCCACAAAAACTCTATTTGTGATTAACTTTGACCCGATTCGCACAAGAGTTAGTGATATAGAGAGACACTTCAAACCTTATGGGGAGCTTCATCATGTTCGAATTCGTCGGAACTTTGCATTTGTGCAGTATGAAACACAAGAAGATGCTACTAAAGCTTTAGAGTGTACAAATATGAGTAAGATACTGGACAGGGTTGTGTCTGTGGAGTATGCTCTGAGGGATGATAGTGAGAGGGTTGACAATTATGGAAGTCCCAGGAGAGGAGGGGGTCTTGCTAGATCTCCCAGTCCAGGTTATCGCAGGAGACCAAGTCCTGACTATGGCCGTCCACGCAGTCCTGCGTATGATAGGTATAGTGGACCGGACAGGCGTAGGAGTCCTGATTACGGAAGAAACAGGAGTCCTGATTATGGCAGGAACAGGAGTCCTGAATACGGAAGATATCGCAGTCGTTCCCCTATACGAAGGTCAAGAACTTAG | 705 | 0.4539 | MICFLIQHIYSFMCISPHLNSGFAFVYYEDERDAEEAIRALDNVPFGHDKRRLSVEWARGERGRHRDGSKANQKPTKTLFVINFDPIRTRVSDIERHFKPYGELHHVRIRRNFAFVQYETQEDATKALECTNMSKILDRVVSVEYALRDDSERVDNYGSPRRGGGLARSPSPGYRRRPSPDYGRPRSPAYDRYSGPDRRRSPDYGRNRSPDYGRNRSPEYGRYRSRSPIRRSRT | 234 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu08g00881 | 234 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 77 | 148 | IPR000504 | GO:0003723 | |
Tsu08g00881 | 234 | Gene3D | - | 72 | 157 | IPR012677 | - | |
Tsu08g00881 | 234 | SUPERFAMILY | RNA-binding domain, RBD | 19 | 151 | IPR035979 | GO:0003676 | |
Tsu08g00881 | 234 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 22 | 60 | IPR000504 | GO:0003723 | |
Tsu08g00881 | 234 | MobiDBLite | consensus disorder prediction | 153 | 234 | - | - | |
Tsu08g00881 | 234 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 19 | 46 | IPR000504 | GO:0003723 | |
Tsu08g00881 | 234 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 79 | 141 | IPR000504 | GO:0003723 | |
Tsu08g00881 | 234 | PANTHER | SERINE/ARGININE-RICH SPLICING FACTOR RS31-RELATED | 20 | 187 | IPR029537 | GO:0000398|GO:0005681 | |
Tsu08g00881 | 234 | SMART | rrm1_1 | 78 | 144 | IPR000504 | GO:0003723 | |
Tsu08g00881 | 234 | MobiDBLite | consensus disorder prediction | 191 | 226 | - | - | |
Tsu08g00881 | 234 | PANTHER | SERINE/ARGININE RICH SPLICING FACTOR | 20 | 187 | - | - | |
Tsu08g00881 | 234 | Gene3D | - | 13 | 71 | IPR012677 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu08g00881 | Tsu-Chr8 | 9647930 | 9650727 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu08g00881 | 22 | 150 | Eukaryotic Initiation Factors Gene Family | AT1G49760 | 25.517 | 4.19e-07 | 48.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu08g00881 | K12893 | - | gmx:100797709 | 336.65 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu08g00881 | 08 | 9647930 | 9650727 | Tsu08g00881 | 08 | 9647930 | 9650727 | ECH |