Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00870 ATGGGTTCAACATCAAAGATTTTAACTTTTGAGGATGTGGCTAAGCACAATCACAAGAAAGATTGTTGGATCATAGTCAACAaaaagGTATATGATGTTACGTCATTTTTGGATGATCATCCAGGAGGTGATGAGGCTTTACTGTCTGCTACAGGGAAGGACGCCACCGCCGATTTCGAAGATGTTGGCCACAGTGACTCAGCAGTAGAGATTATGGAAAAGTACTTTGTTGGGGAGGTTGACACCACTACTCTTCCATCAGAAGTTAAGAAGAATCCAGCACCACAAGTTCAAGCAACTACCTTAAACAATGAATCTTCTGGATTCATTTTGAAGTTCTTGCAGTACCTGGTGCCATTGCTGATATTGGGCTCTGCATTTGCACTGCAGTACTATGGAAAAAAAAGCAAGTCCAATGAATCATAA 426 0.4085 MGSTSKILTFEDVAKHNHKKDCWIIVNKKVYDVTSFLDDHPGGDEALLSATGKDATADFEDVGHSDSAVEIMEKYFVGEVDTTTLPSEVKKNPAPQVQATTLNNESSGFILKFLQYLVPLLILGSAFALQYYGKKSKSNES 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00870 141 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Tsu08g00870 141 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Tsu08g00870 141 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Tsu08g00870 141 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Tsu08g00870 141 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Tsu08g00870 141 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Tsu08g00870 141 PANTHER CYTOCHROME B5 1 136 - -
Tsu08g00870 141 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Tsu08g00870 141 Gene3D - 2 85 IPR036400 -
Tsu08g00870 141 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 89 IPR036400 -
Tsu08g00870 141 SMART Cyt_b5_2 8 81 IPR001199 -
Tsu08g00870 141 PANTHER CYTOCHROME B5 ISOFORM C 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00870 Tsu-Chr8 9530077 9535108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00870 1 135 NADPH P450 reductases AT5G53560 57.037 2.14e-55 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00870 K23490 - gmx:100500069 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04716 07 51546780 51550724 Tsu08g00870 08 9530077 9535108 PCT